Staphylococcus saprophyticus subsp saprophyticus ATCC 15305

The prediction was done using a set of srn genes identified from SRD curated sRNAs.

Numbers of SRD’S predicted srn sequences =

subject_seq_id	identity	length	mismatch	gapopen	query_start	query_end	subject_start	subject_end	evalue	bitscore
tmRNA	86.23	363	41	9	1972298	1972655	359	1	2e-105	385
4.5S	92.74	234	17	0	2359149	2359382	234	1	2e-91	339
srn_3960_sRNA323	97.28	184	5	0	744096	744279	184	1	1e-83	313
srn_3960_sRNA323	97.28	184	5	0	2354523	2354706	1	184	1e-83	313
srn_3960_sRNA323	96.74	184	6	0	960003	960186	184	1	5e-82	307
srn_3960_sRNA323	96.74	184	6	0	842090	842273	184	1	5e-82	307
srn_3960_sRNA323	96.74	184	6	0	2305640	2305823	1	184	5e-82	307
srn_3960_sRNA323	96.74	184	6	0	2310918	2311101	1	184	5e-82	307
6S	90.37	218	12	9	1179161	1179374	218	6	4e-73	278
RNAseP	83.75	277	33	9	1342602	1342869	435	162	2e-65	252
srn_1930_rsaOF	83.15	273	42	4	1979302	1979572	277	7	1e-63	246
srn_2130_rsaE	86.45	214	21	7	1857409	1857618	216	7	4e-58	228
srn_2090_sRNA180	82.93	246	42	0	1901812	1902057	268	23	2e-56	222
srn_0120_Teg6as	99.17	120	1	0	1680233	1680352	287	406	9e-55	217
srn_0120_Teg6as	99.17	120	1	0	1706219	1706338	287	406	9e-55	217
srn_3510_Teg74	90.30	165	11	5	1025662	1025822	293	130	4e-53	211
srn_9380_sRNA298	98.29	117	1	1	1706219	1706335	18	133	7e-51	204
srn_3040_Sau50	93.38	136	9	0	1317214	1317349	136	1	3e-50	202
srn_3550_Teg75	91.78	146	7	4	1011114	1011257	145	3	3e-49	198
srn_2880_RsaOQ	83.76	197	21	9	1425084	1425277	205	17	2e-42	176
srn_4430_sRNA360	83.15	184	31	0	610079	610262	193	10	3e-40	169
srn_1940_sRNA165	80.69	233	27	16	1975623	1975848	226	5	3e-39	165
srn_1410_Teg77	92.11	114	8	1	2279522	2279635	113	1	2e-37	159
srn_1140_Sau82	86.71	143	17	1	2356129	2356269	143	1	6e-37	158
srn_3580_SprA1	83.62	177	18	8	2506921	2507092	206	36	2e-36	156
srn_3080_Teg66	88.28	128	12	2	1304571	1304697	135	10	9e-35	150
srn_3080_Teg66	90.18	112	10	1	1025706	1025816	129	18	4e-33	145
srn_3910_RNAIII	82.66	173	16	11	875623	875793	162	2	6e-32	141
srn_4270_sRNA347	93.55	93	2	3	712652	712742	91	1	3e-30	135
srn_9400_sRNA307	90.72	97	7	2	1706123	1706218	2	97	4e-28	128
srn_4140_sRNA338	100.00	68	0	0	963301	963368	68	1	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	845205	845272	68	1	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	747212	747279	68	1	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	2302641	2302708	1	68	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	2307839	2307906	1	68	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	2351524	2351591	1	68	2e-27	126
srn_4010_sRNA327	89.00	100	7	4	787929	788027	174	78	7e-26	121
srn_4280_Sau73	90.00	90	9	0	698795	698884	90	1	9e-25	117
srn_3310_sRNA263	86.24	109	13	2	1132940	1133047	154	47	9e-25	117
srn_3650_sRNA289	90.00	90	7	2	985388	985476	114	26	3e-24	115
srn_2610_Sau24	94.37	71	1	3	1590514	1590583	69	1	2e-21	106
srn_1320_sRNA117	98.28	58	1	0	2352746	2352803	58	1	3e-20	102
srn_1320_sRNA117	98.28	58	1	0	2309061	2309118	58	1	3e-20	102
srn_1320_sRNA117	98.28	58	1	0	2303863	2303920	58	1	3e-20	102
srn_1320_sRNA117	98.28	58	1	0	746000	746057	1	58	3e-20	102
srn_1320_sRNA117	98.28	58	1	0	843993	844050	1	58	3e-20	102
srn_1320_sRNA117	98.28	58	1	0	962089	962146	1	58	3e-20	102
srn_3150_Teg83	92.96	71	1	2	1259199	1259265	99	29	1e-19	100
srn_9470_sRNA322	98.18	55	1	0	962096	962150	55	1	1e-18	97.1
srn_9470_sRNA322	98.18	55	1	0	844000	844054	55	1	1e-18	97.1
srn_9470_sRNA322	98.18	55	1	0	746007	746061	55	1	1e-18	97.1
srn_9470_sRNA322	98.18	55	1	0	2303859	2303913	1	55	1e-18	97.1
srn_9470_sRNA322	98.18	55	1	0	2309057	2309111	1	55	1e-18	97.1
srn_9470_sRNA322	98.18	55	1	0	2352742	2352796	1	55	1e-18	97.1
srn_9200_sRNA101	98.18	55	1	0	2352751	2352805	55	1	1e-18	97.1
srn_9200_sRNA101	98.18	55	1	0	2309066	2309120	55	1	1e-18	97.1
srn_9200_sRNA101	98.18	55	1	0	2303868	2303922	55	1	1e-18	97.1
srn_9200_sRNA101	98.18	55	1	0	745998	746052	1	55	1e-18	97.1
srn_9200_sRNA101	98.18	55	1	0	843991	844045	1	55	1e-18	97.1
srn_9200_sRNA101	98.18	55	1	0	962087	962141	1	55	1e-18	97.1
srn_4150_sRNA339	98.18	55	1	0	962094	962148	55	1	1e-18	97.1
srn_4150_sRNA339	98.18	55	1	0	843998	844052	55	1	1e-18	97.1
srn_4150_sRNA339	98.18	55	1	0	746005	746059	55	1	1e-18	97.1
srn_4150_sRNA339	98.18	55	1	0	2303861	2303915	1	55	1e-18	97.1
srn_4150_sRNA339	98.18	55	1	0	2309059	2309113	1	55	1e-18	97.1
srn_4150_sRNA339	98.18	55	1	0	2352744	2352798	1	55	1e-18	97.1
srn_3300_Teg70	84.95	93	10	4	1148940	1149030	91	1	6e-17	91.6
srn_1460_sRNA128	100.00	47	0	0	2265627	2265673	47	1	7e-16	87.9
srn_1810_Teg51	89.55	67	5	2	2052474	2052539	74	9	1e-14	84.2
srn_4390_rsaOG	89.55	67	3	3	636142	636207	64	1	3e-14	82.4
srn_0170_Teg9as	97.83	46	1	0	1680310	1680355	1	46	1e-13	80.5
srn_3160_RsaOD	81.63	98	11	6	1235722	1235815	95	1	6e-12	75.0
srn_3470_sRNA274	89.47	57	6	0	1046827	1046883	59	3	2e-11	73.1
srn_1400_sRNA124	97.62	42	1	0	2280698	2280739	44	3	2e-11	73.1