SRD identifier | Most commun name | Start | End | Strand | Length | Other names | SRD's RNAseq evidence | Category | Authors (references) | Show sequence and sRNA tools |
---|---|---|---|---|---|---|---|---|---|---|
srn_0010 | sRNA412 | 314 | 512 | + | 199 | sRNA412 | 5'UTR | Show | ||
srn_0020 | sRNA1 | 8415 | 8586 | - | 172 | sRNA1 | ND | Show | ||
srn_0030 | Teg35 | 12499 | 12724 | + | 226 | Teg35_sRNA2 | Transcript | T-box_uptream_of_serS | Beaume_et_al._2010 | Show |
srn_0040 | Sau6817 | 14275 | 14365 | - | 91 | Sau6817 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0050 | Teg1 | 15814 | 16042 | + | 229 | Teg1_sRNA3 | Transcript | Cis-acting_regulators | Beaume_et_al._2010 | Show |
srn_0060 | Sau65 | 21733 | 21790 | - | 58 | Sau65 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0070 | sRNA4 | 24985 | 25219 | - | 235 | sRNA4 | ND | Show | ||
srn_0080 | Teg107 | 29791 | 29977 | + | 187 | Teg107 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_0090 | sRNA5 | 31581 | 31913 | - | 333 | sRNA5 | ND | Show | ||
srn_0100 | sRNA6 | 33872 | 34178 | - | 307 | sRNA6 | ND | Show | ||
srn_0110 | Teg5as | 35632 | 35962 | - | 331 | Teg5as | ND | Beaume_et_al._2010 | Show | |
srn_0120 | Teg6as | 36090 | 36495 | - | 406 | Teg6as | 3'UTR | Beaume_et_al._2010 | Show | |
srn_0130 | Teg7as | 37138 | 37174 | + | 37 | Teg7as_sRNA7 | ND | Beaume_et_al._2010 | Show | |
srn_0140 | Teg8as | 38174 | 38258 | + | 85 | Teg8as_sRNA8 | ND | Beaume_et_al._2010 | Show | |
srn_0150 | Teg36 | 39700 | 39745 | - | 46 | Teg36 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_0160 | Teg39as | 39987 | 40197 | - | 211 | Teg39as | 3'UTR | Beaume_et_al._2010 | Show | |
srn_0170 | Teg9as | 41799 | 41844 | + | 46 | Teg9as | ND | Beaume_et_al._2010 | Show | |
srn_0180 | sRNA9 | 42486 | 42519 | + | 34 | sRNA9 | ND | Show | ||
srn_0190 | sRNA10 | 46282 | 46315 | + | 34 | sRNA10 | ND | Show | ||
srn_0200 | Teg4 | 49297 | 49441 | - | 145 | Teg4_sRNA11 | Transcript | Trans-encoded_sRNAs | Beaume_et_al._2010 | Show |
srn_0210 | Teg10as | 52555 | 52597 | + | 43 | Teg10as | ND | Beaume_et_al._2010 | Show | |
srn_0220 | sRNA261 | 55762 | 55977 | + | 216 | sRNA261 | Transcript | Show | ||
srn_0230 | rsaOX | 70209 | 70686 | + | 478 | rsaOX_Teg14as | ND | Cis-encoded_sRNA | Bohn_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_0240 | Teg37 | 73414 | 73468 | + | 55 | Teg37 | ND | Beaume_et_al._2010 | Show | |
srn_0250 | Sau6372 | 89511 | 89563 | + | 53 | Sau6372 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0260 | Teg15as | 110074 | 110317 | - | 244 | Teg15as_sRNA14 | Antisense | Beaume_et_al._2010 | Show | |
srn_0270 | Teg16as | 114834 | 115040 | + | 207 | Teg16as_sRNA15 | ND | Beaume_et_al._2010 | Show | |
srn_0275 | tsr6 | 115268 | 115377 | + | 110 | tsr6 | ND | Show | ||
srn_0280 | sRNA16 | 122692 | 123063 | + | 372 | sRNA16 | Antisense | Show | ||
srn_0290 | sRNA17 | 135064 | 135279 | - | 216 | sRNA17 | ND | Show | ||
srn_0300 | sRNA18 | 136394 | 136654 | - | 261 | sRNA18 | ND | Show | ||
srn_0310 | Sau6873 | 154263 | 154326 | + | 64 | Sau6873 | CDS | Abu-Qatouseh_et_al._2010 | Show | |
srn_0320 | Sau16 | 154770 | 155000 | - | 231 | Teg129_Sau16_sRNA19 | ND | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show | |
srn_0330 | Sau6527 | 160639 | 160696 | - | 58 | Sau6527 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0340 | Sau6442 | 172483 | 172549 | - | 67 | Sau6442 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0350 | sRNA20 | 172913 | 173066 | - | 154 | sRNA20 | ND | Show | ||
srn_0360 | Teg17as | 180358 | 180600 | - | 243 | Teg17as_sRNA21 | ND | Beaume_et_al._2010 | Show | |
srn_0370 | sRNA22 | 185274 | 185624 | - | 351 | sRNA22 | ND | Show | ||
srn_0380 | Teg140 | 196890 | 196966 | + | 77 | Teg140_sRNA23 | 3'UTR | Beaume_et_al._2010 | Show | |
srn_0390 | sRNA24 | 201084 | 201354 | - | 271 | sRNA24 | ND | Show | ||
srn_0400 | Sau22 | 202189 | 202244 | + | 56 | Sau22 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0410 | sRNA25 | 203915 | 204229 | - | 315 | sRNA25 | ND | Show | ||
srn_0420 | sRNA26 | 206690 | 206942 | + | 253 | sRNA26 | ND | Show | ||
srn_0430 | sau53 | 208728 | 208919 | - | 192 | sau53 | ND | Cis-encoded_sRNA | Abu-Qatouseh_et_al._2010 | Show |
srn_0440 | rsaK | 216918 | 217129 | - | 212 | rsaK_Teg38_sRNA27 | Transcript | leader_of_glcA | Beaume_et_al._2010 | Show |
srn_0450 | sRNA28 | 221173 | 221254 | - | 82 | sRNA28 | ND | Show | ||
srn_0455 | tsr9 | 221892 | 222276 | - | 385 | tsr9 | CDS | Show | ||
srn_0460 | Teg39 | 233141 | 233216 | - | 76 | Teg39 | ND | Beaume_et_al._2010 | Show | |
srn_0470 | Sau6292 | 239261 | 239309 | - | 49 | Sau6292 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0480 | Sau6717 | 244645 | 244689 | - | 45 | Sau6717 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0490 | Sau55 | 248919 | 248961 | - | 43 | Sau55 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0500 | sRNA30 | 251432 | 251576 | - | 145 | sRNA30 | ND | Show | ||
srn_0510 | rsaG | 254707 | 254843 | + | 137 | rsaG_Teg93_sRNA31 | Transcript | Trans-encoded_sRNAs | Beaume_et_al._2010 | Show |
srn_0520 | sRNA32 | 255362 | 255482 | + | 121 | sRNA32 | ND | Show | ||
srn_0530 | sRNA33 | 257099 | 257309 | + | 211 | sRNA33 | ND | Show | ||
srn_0540 | sRNA34 | 262119 | 262292 | - | 174 | sRNA34 | ND | Show | ||
srn_0550 | Sau6454 | 272771 | 273221 | + | 451 | Sau6454 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0560 | Sau6009 | 277500 | 277566 | - | 67 | Sau6009 | CDS | Abu-Qatouseh_et_al._2010 | Show | |
srn_0570 | sRNA35 | 277624 | 277818 | + | 195 | sRNA35 | ND | Show | ||
srn_0580 | Sau6569 | 281164 | 281329 | + | 166 | Sau6569_sRNA36 | 5'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_0590 | sRNA37 | 284219 | 284358 | + | 140 | sRNA37 | 5'UTR | Show | ||
srn_0600 | sRNA38 | 285417 | 285540 | - | 124 | sRNA38 | ND | Show | ||
srn_0610 | sRNA39 | 288647 | 288716 | + | 70 | sRNA39 | ND | Show | ||
srn_0620 | sRNA40 | 290814 | 290973 | - | 160 | sRNA40 | ND | Show | ||
srn_0630 | Sau6931 | 291722 | 291767 | - | 46 | Sau6931 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0640 | sRNA41 | 296422 | 296509 | + | 88 | sRNA41 | 3'UTR | Show | ||
srn_0650 | sRNA42 | 298423 | 298694 | - | 272 | sRNA42 | ND | Show | ||
srn_0660 | Sau6526 | 299068 | 299142 | - | 75 | Sau6526 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0670 | Sau6994 | 302360 | 302663 | - | 304 | Sau6994_sRNA43 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0680 | Sau6807 | 304199 | 304270 | - | 72 | Sau6807 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0690 | sRNA44 | 305733 | 306077 | - | 345 | sRNA44 | ND | Show | ||
srn_0700 | sRNA45 | 311625 | 311687 | - | 63 | sRNA45 | ND | Show | ||
srn_0710 | sRNA46 | 320278 | 320502 | - | 225 | sRNA46 | ND | Show | ||
srn_0720 | sRNA47 | 324409 | 324681 | + | 273 | sRNA47 | ND | Show | ||
srn_0730 | sRNA48 | 326376 | 326631 | + | 256 | sRNA48 | ND | Show | ||
srn_0740 | Sau29 | 337172 | 337253 | - | 82 | Sau29 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0750 | sRNA50 | 344124 | 344197 | - | 74 | sRNA50 | ND | Show | ||
srn_0760 | sRNA51 | 345589 | 345712 | + | 124 | sRNA51 | ND | Show | ||
srn_0765 | tsr11 | 349729 | 349822 | - | 94 | tsr11 | 5'UTR | Show | ||
srn_0770 | Teg18as | 361925 | 362789 | + | 865 | Teg18as_sRNA53 | Transcript | Beaume_et_al._2010 | Show | |
srn_0780 | Sau6733 | 364853 | 364932 | + | 80 | Sau6733 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0790 | Sau6657 | 365610 | 365700 | - | 91 | Sau6657 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0795 | srn_0795 | 367371 | 367649 | + | 279 | srn_0795 | Transcript | Show | ||
srn_0800 | sRNA55 | 370005 | 370179 | + | 175 | sRNA55 | 5'UTR | Show | ||
srn_0810 | sRNA56 | 370374 | 370661 | - | 288 | sRNA56 | ND | Show | ||
srn_0820 | sRNA57 | 373929 | 374037 | - | 109 | sRNA57 | ND | Show | ||
srn_0830 | sRNA58 | 374575 | 374692 | - | 118 | sRNA58 | ND | Show | ||
srn_0840 | Sau5974 | 374660 | 374732 | - | 73 | Sau5974 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0850 | sRNA59 | 388501 | 388630 | - | 130 | sRNA59 | ND | Show | ||
srn_0860 | RsaOB | 407503 | 407923 | - | 421 | RsaOB_Teg40_sRNA61 | Transcript | Cis-acting_regulators | Marchais_et_al._2009_and_Beaume_et_al._2010 | Show |
srn_0870 | Teg38as | 411155 | 411236 | - | 82 | Teg38as_sRNA63 | Antisense | Beaume_et_al._2010 | Show | |
srn_0880 | Sau5971 | 413160 | 413255 | + | 96 | Sau5971 | Transcript | Trans-encoded_sRNAs | Abu-Qatouseh_et_al._2010 | Show |
srn_0890 | sRNA71 | 418388 | 418478 | - | 91 | sRNA71 | ND | Show | ||
srn_0900 | sRNA72 | 421324 | 421354 | + | 31 | sRNA72 | ND | Show | ||
srn_0910 | sRNA73 | 425906 | 426065 | + | 160 | sRNA73 | ND | Show | ||
srn_0920 | Teg35as | 427981 | 428040 | - | 60 | Teg35as | ND | Beaume_et_al._2010 | Show | |
srn_0930 | Teg76 | 430826 | 431048 | + | 223 | Teg76_sRNA74 | Transcript | Purine_riboswitch_upstream_of_xprT | Beaume_et_al._2010 | Show |
srn_0940 | Sau6356 | 435678 | 435738 | - | 61 | Sau6356 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0950 | Sau63 | 436964 | 437054 | - | 91 | Sau63_Teg146_sRNA83 | Transcript | S-box-SAM_riboswitch | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_0960 | Teg147 | 439096 | 439151 | + | 56 | Teg147_sRNA85 | ND | Beaume_et_al._2010 | Show | |
srn_0970 | Sau18 | 443125 | 443313 | - | 189 | Sau18 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_0980 | sRNA86 | 445425 | 445494 | - | 70 | sRNA86 | ND | Show | ||
srn_0990 | sRNA87 | 446341 | 446562 | - | 222 | sRNA87 | ND | Show | ||
srn_1000 | sRNA88 | 447803 | 447848 | - | 46 | sRNA88 | ND | Show | ||
srn_1010 | sRNA89 | 449733 | 449922 | - | 190 | sRNA89 | ND | Show | ||
srn_1015 | tsr12 | 450776 | 450837 | + | 62 | tsr12 | CDS | Show | ||
srn_1020 | sRNA90 | 456524 | 456575 | + | 52 | sRNA90 | ND | Show | ||
srn_1030 | sRNA91 | 461802 | 461959 | + | 158 | sRNA91 | ND | Show | ||
srn_1040 | sRNA92 | 464715 | 464745 | - | 31 | sRNA92 | ND | Show | ||
srn_1050 | sRNA93 | 465647 | 465762 | - | 116 | sRNA93 | ND | Show | ||
srn_1060 | Teg149 | 469468 | 469518 | + | 51 | Teg149_sRNA94 | ND | Beaume_et_al._2010 | Show | |
srn_1070 | Sau41 | 469933 | 470088 | - | 156 | Sau41 | Transcript | Trans-encoded_sRNAs | Abu-Qatouseh_et_al._2010 | Show |
srn_1080 | RsaX05 | 470637 | 470841 | + | 205 | RsaX05_Teg41_sRNA95 | Transcript | Beaume_et_al._2010 | Show | |
srn_1090 | Teg19as | 473697 | 476172 | - | 2476 | Teg19as_sRNA96 | ND | Beaume_et_al._2010 | Show | |
srn_1095 | tsr13 | 478203 | 478286 | + | 84 | tsr13 | CDS | Show | ||
srn_1100 | Sau6054 | 485926 | 486068 | + | 143 | Sau6054 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1110 | Sau57 | 499302 | 499430 | - | 129 | Sau57 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1120 | sRNA97 | 499916 | 499970 | - | 55 | sRNA97 | ND | Show | ||
4.5S | 4.5S | 501430 | 501682 | + | 253 | ffs_4.5S_IGRLF1_WAN01CBPQ_Teg42_sRNA98 | Transcript | Trans-encoded_sRNAs | Beaume_et_al._2010_and_Roberts_et_al._2006 | Show |
srn_1130 | sRNA99 | 501452 | 501533 | - | 82 | sRNA99 | ND | Show | ||
srn_1140 | Sau82 | 504654 | 504796 | + | 143 | Sau82 | CDS | Abu-Qatouseh_et_al._2010 | Show | |
srn_1150 | sRNA100 | 506548 | 506575 | - | 28 | sRNA100 | ND | Show | ||
srn_1160 | sRNA102 | 511544 | 511579 | + | 36 | sRNA102 | ND | Show | ||
srn_1170 | sRNA103 | 511816 | 511853 | + | 38 | sRNA103 | ND | Show | ||
srn_1180 | Sau83 | 521225 | 521294 | - | 70 | Sau83 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1190 | sRNA104 | 522109 | 522193 | - | 85 | sRNA104 | ND | Show | ||
srn_1200 | sRNA105 | 523667 | 523700 | - | 34 | sRNA105 | ND | Show | ||
srn_1210 | sRNA106 | 523788 | 523992 | - | 205 | sRNA106 | ND | Show | ||
srn_1220 | sRNA107 | 524819 | 525001 | - | 183 | sRNA107 | ND | Show | ||
srn_1230 | sRNA108 | 527839 | 528028 | - | 190 | sRNA108 | ND | Show | ||
srn_1240 | sRNA109 | 534077 | 534167 | - | 91 | sRNA109 | ND | Show | ||
srn_1250 | sRNA110 | 538449 | 538632 | - | 184 | sRNA110 | ND | Show | ||
srn_1260 | Sau62 | 539955 | 540027 | - | 73 | Sau62 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1270 | Teg44 | 540718 | 540943 | + | 226 | Teg44_sRNA111 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_1280 | sRNA112 | 547129 | 547288 | + | 160 | sRNA112 | 3'UTR | Show | ||
srn_1290 | sRNA113 | 548740 | 548767 | - | 28 | sRNA113 | ND | Show | ||
srn_1300 | sRNA115 | 550972 | 551002 | - | 31 | sRNA115 | ND | Show | ||
srn_1310 | sRNA116 | 551858 | 551888 | - | 31 | sRNA116 | ND | Show | ||
srn_1320 | sRNA117 | 552926 | 552983 | - | 58 | sRNA117 | ND | Show | ||
srn_1330 | sRNA118 | 555727 | 555902 | - | 176 | sRNA118 | ND | Show | ||
srn_1340 | sRNA119 | 569002 | 569343 | - | 342 | sRNA119 | ND | Show | ||
srn_1350 | Teg45 | 570162 | 570452 | + | 291 | Teg45_sRNA120 | Transcript | Term_upstream_of_cysET-box | Beaume_et_al._2010 | Show |
srn_1360 | Sau67 | 573157 | 573217 | - | 61 | Sau67 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1370 | sRNA121 | 574885 | 574915 | - | 31 | sRNA121 | ND | Show | ||
srn_1380 | Teg46 | 574985 | 575108 | + | 124 | Teg46_sRNA122 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_1390 | sRNA123 | 575060 | 575303 | - | 244 | sRNA123 | ND | Show | ||
srn_1400 | sRNA124 | 576472 | 576515 | - | 44 | sRNA124 | ND | Show | ||
srn_1410 | Teg77 | 577556 | 577704 | + | 149 | Teg77_sRNA125 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_1420 | Sau60 | 579440 | 579534 | + | 95 | Sau60_SSR155 | 5'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_1430 | sRNA126 | 580246 | 580540 | - | 295 | sRNA126 | ND | Show | ||
srn_1440 | sRNA127 | 589029 | 589060 | - | 32 | sRNA127 | ND | Show | ||
srn_1450 | Sau6057 | 590695 | 590751 | + | 57 | Sau6057 | 5'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_1460 | sRNA128 | 591400 | 591446 | - | 47 | sRNA128 | ND | Show | ||
srn_1470 | sRNA129 | 607073 | 607886 | - | 814 | sRNA129 | ND | Show | ||
srn_1480 | sRNA130 | 611532 | 612140 | - | 609 | sRNA130 | ND | Show | ||
srn_1490 | Sau6477 | 626915 | 627130 | - | 216 | RsaOI_Sau6477_Teg47_sRNA131 | Transcript | Trans-encoded_sRNAs | Bohn_et_al._2010,_Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_1500 | Sau6667 | 630792 | 630839 | + | 48 | Sau6667 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1505 | S204 | 630852 | 631334 | + | 483 | S204 | ND | Show | ||
srn_1510 | rsaA | 637112 | 637254 | + | 143 | rsaA_rsaOJ_sau64_Teg88_sRNA132 | Transcript | Trans-encoded_sRNAs | Bohn_et_al._2010,_Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_1520 | Sau76 | 637272 | 637393 | + | 122 | Sau76 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1530 | sRNA133 | 655286 | 655557 | + | 272 | sRNA133 | 5'UTR | Show | ||
srn_1540 | Teg48 | 666718 | 666844 | - | 127 | Teg48_sRNA134 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_1550 | Teg49 | 666952 | 667114 | - | 163 | Teg49_sRNA134 | Transcript | Beaume_et_al._2010 | Show | |
srn_1560 | Teg30as | 678260 | 678320 | + | 61 | Teg30as | ND | Beaume_et_al._2010 | Show | |
srn_1570 | RsaOW2 | 679615 | 679679 | - | 65 | RsaOW2_Teg98 | ND | Bohn_et_al._2010_and_Beaume_et_al._2010 | Show | |
srn_1580 | sbrC | 679620 | 680738 | + | 1119 | sbrC | Transcript | Trans-encoded_sRNAs | Nielsen_et_al._2010 | Show |
srn_1590 | rsaC | 679909 | 680452 | - | 544 | rsaC_Teg90_sRNA135 | Transcript | Beaume_et_al._2010 | Show | |
srn_1600 | Sau6912 | 685080 | 685140 | - | 61 | Sau6912 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1610 | sRNA136 | 689862 | 690143 | - | 282 | sRNA136 | ND | Show | ||
srn_1620 | Sau6836 | 692170 | 692240 | + | 71 | Sau6836 | 5'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_1630 | Teg99 | 694341 | 694422 | + | 82 | Teg99_sRNA137 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_1640 | rsaD | 695867 | 696043 | - | 177 | rsaD_Teg91_sRNA138 | Transcript | Beaume_et_al._2010 | Show | |
srn_1650 | sRNA139 | 703132 | 703390 | + | 259 | sRNA139 | 5'UTR | Show | ||
srn_1660 | sRNA140 | 713008 | 713459 | + | 452 | sRNA140 | 5'UTR | Show | ||
srn_1670 | Teg20as | 715434 | 716442 | + | 1009 | Teg20as_sRNA141 | Antisense | Beaume_et_al._2010 | Show | |
srn_1680 | sRNA142 | 716725 | 716850 | + | 126 | sRNA142 | 5'UTR | Show | ||
srn_1690 | sRNA143 | 722479 | 722684 | + | 206 | sRNA143 | 5'UTR | Show | ||
srn_1700 | sRNA144 | 728451 | 728483 | - | 33 | sRNA144 | ND | Show | ||
srn_1710 | sRNA145 | 737059 | 737097 | - | 39 | sRNA145 | ND | Show | ||
srn_1720 | sRNA146 | 741782 | 742078 | - | 297 | sRNA146 | ND | Show | ||
srn_1730 | Sau7006 | 749666 | 749751 | + | 86 | Sau7006 | CDS | Abu-Qatouseh_et_al._2010 | Show | |
srn_1740 | sRNA147 | 750903 | 751094 | - | 192 | sRNA147 | ND | Show | ||
srn_1750 | sRNA148 | 757013 | 757041 | + | 29 | sRNA148 | ND | Show | ||
srn_1760 | sRNA149 | 761119 | 761245 | - | 127 | sRNA149 | Transcript | Show | ||
srn_1770 | rsaOC | 761140 | 761238 | + | 99 | rsaOC_RsaX08_Teg50 | Transcript | pre-Q1_riboswitch_upstream_of_SA0668 | Marchais_et_al._2009,_Bohn_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_1780 | Sau66 | 763840 | 763918 | + | 79 | Sau66 | Transcript | Cis-encoded_sRNA | Abu-Qatouseh_et_al._2010 | Show |
srn_1790 | sRNA150 | 777583 | 777624 | - | 42 | sRNA150 | ND | Show | ||
srn_1800 | sRNA151 | 778892 | 778955 | + | 64 | sRNA151 | ND | Show | ||
srn_1810 | Teg51 | 782693 | 782898 | + | 206 | Teg51_sRNA152 | Transcript | Purine_riboswitch_upstream_of_nrdl | Beaume_et_al._2010 | Show |
srn_1820 | sRNA154 | 790875 | 791468 | - | 594 | sRNA154 | 3'UTR | Show | ||
srn_1830 | sRNA155 | 798860 | 799062 | + | 203 | sRNA155 | ND | Show | ||
srn_1840 | sRNA156 | 800176 | 800234 | + | 59 | sRNA156 | 5'UTR | Show | ||
srn_1850 | sRNA157 | 802802 | 803053 | - | 252 | sRNA157 | ND | Show | ||
srn_1860 | sRNA158 | 810032 | 810296 | - | 265 | sRNA158 | ND | Show | ||
srn_1870 | Sau6428 | 812742 | 812812 | + | 71 | Sau6428_Teg109_sRNA159 | ND | Abu-Qatouseh_et_al._2010Beaume_et_al._2010 | Show | |
srn_1880 | sRNA160 | 814153 | 814208 | - | 56 | sRNA160 | ND | Show | ||
srn_1890 | sRNA161 | 822881 | 823175 | - | 295 | sRNA161 | ND | Show | ||
srn_1900 | Sau15 | 828852 | 828943 | + | 92 | Sau15 | Antisense | Abu-Qatouseh_et_al._2010 | Show | |
srn_1910 | rsaH | 829511 | 829638 | + | 128 | rsaH_rsaOK_sau6059_Teg94_IGR7_sRNA162 | Transcript | Marchais_et_al._2009,_Bohn_et_al._2010_and_Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show | |
srn_1920 | Teg95 | 829873 | 830060 | + | 188 | Teg95_sRNA163 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_1930.1 | rsaOF | 831180 | 831237 | + | 58 | rsaOF_Teg12 | 5'UTR | Marchais_et_al._2009_and_Beaume_et_al._2010 | Show | |
srn_1930 | rsaOF | 837152 | 837470 | - | 319 | rsaOF_Teg12_sRNA164 | ND | Show | ||
srn_1940 | sRNA165 | 840639 | 840864 | - | 226 | sRNA165 | ND | Show | ||
tmRNA | tmRNA | 843797 | 844155 | + | 359 | tmR_WAN014GIY_Teg150_ssrA_sRNA166 | Transcript | Roberts_et_al.2006_and_Beaume_et_al._2010 | Show | |
srn_1950 | sRNA167 | 847738 | 847855 | - | 118 | sRNA167 | ND | Show | ||
srn_1960 | rsaOL | 857201 | 857273 | - | 73 | rsaOL_Sau07_Teg100_IGR14_sRNA168 | 3'UTR | Trans-encoded_sRNAs | Bohn_et_al._2010,_Abu-Qatouseh_et_al._2010 _and_Beaume_et_al._2010 | Show |
srn_1970 | Sau6769 | 858421 | 858491 | + | 71 | Sau6769 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_1980 | sRNA169 | 859109 | 859399 | - | 291 | sRNA169 | CDS | Show | ||
srn_1990 | Teg40as | 859611 | 859910 | - | 300 | Teg40as_sRNA170 | Antisense | Beaume_et_al._2010 | Show | |
srn_2000 | Sau81 | 859895 | 859947 | - | 53 | Sau81 | CDS | Abu-Qatouseh_et_al._2010 | Show | |
srn_2010 | sRNA261 | 872181 | 872396 | - | 216 | sRNA261 | 5'UTR | Show | ||
srn_2020 | sRNA171 | 873946 | 874007 | - | 62 | sRNA171 | ND | Show | ||
srn_2030 | Teg52 | 875399 | 875515 | + | 117 | Teg52_rsaOM_Teg52_IGR20_sRNA172 | 3'UTR | Cis-acting_regulators | Bohn_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2035 | tsr15 | 878905 | 879721 | + | 817 | tsr15 | Antisense | Show | ||
srn_2040 | sRNA176 | 887281 | 887397 | - | 117 | sRNA176 | ND | Show | ||
srn_2050 | sRNA177 | 890959 | 891169 | - | 211 | sRNA177 | ND | Show | ||
srn_2055 | tsr16 | 895299 | 895400 | - | 102 | tsr16 | 3'UTR | Show | ||
srn_2058 | srn_2058 | 905368 | 905608 | + | 241 | srn_2058 | Transcript | Show | ||
srn_2060 | sRNA179 | 908718 | 908901 | - | 184 | sRNA179 | ND | Show | ||
srn_2070 | Sau6851 | 919336 | 919481 | + | 146 | Teg53_Sau6851 | CDS | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show | |
srn_2080 | Sau6851 | 919698 | 919828 | + | 131 | Sau6851_Teg53 | 5'UTR | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show | |
srn_2090 | sRNA180 | 922252 | 922521 | - | 270 | sRNA180 | ND | Show | ||
srn_2100 | sRNA181 | 936456 | 936636 | - | 181 | sRNA181 | ND | Show | ||
srn_2110 | sRNA182 | 937584 | 937656 | - | 73 | sRNA182 | ND | Show | ||
srn_2120 | Sau6305 | 954317 | 954403 | - | 87 | Sau6305 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2125 | tsr17 | 957427 | 957838 | - | 412 | tsr17 | CDS | Show | ||
srn_2130 | rsaE | 975284 | 975742 | + | 459 | rsaE_RsaON_Sau20_Teg92_IGR6_sRNA183 | Transcript | Abu-Qatouseh_et_al._2010_and_Bohn_et_al._2010_and_Beaume_et_al._2010 | Show | |
srn_2140 | sRNA184 | 976663 | 976898 | + | 236 | sRNA184 | ND | Show | ||
srn_2150 | sRNA185 | 980823 | 980932 | - | 110 | sRNA185 | ND | Show | ||
srn_2160 | Sau6374 | 981143 | 981210 | - | 68 | Sau6374 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2170 | sRNA187 | 987276 | 987765 | - | 490 | sRNA187 | ND | Show | ||
srn_2180 | sRNA188 | 989360 | 989609 | - | 250 | sRNA188 | ND | Show | ||
srn_2190 | Sau6513 | 990921 | 990978 | + | 58 | Sau6513 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2200 | Sau6053 | 995862 | 996006 | + | 145 | Sau6053_Teg78_sRNA189 | Transcript | Cis-acting_regulators | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2220 | Sau58 | 1003687 | 1003762 | - | 76 | Sau58 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2230 | sprG2 | 1006183 | 1006423 | + | 241 | sprG2_Teg19b | Transcript | Predicted_toxin-antitoxin_module | Pinel-Marie_et_al._2014_and_Beaume_et_al._2010 | Show |
srn_2240 | sprF2 | 1006366 | 1006481 | - | 116 | sprF2_Sau02_Teg19a_Teg102_sRZN_sRNA190 | Antisense | Predicted_toxin-antitoxin_module | Pinel-Marie_et_al._2014,_Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2250 | sprG4 | 1006440 | 1006808 | + | 369 | sprG4_Teg19b | Transcript | Predicted_toxin-antitoxin_module | Pinel-Marie_et_al._2014,_Beaume_et_al._2010 | Show |
srn_2260 | sprF4 | 1006735 | 1006849 | - | 115 | sprF4_Sau02_Teg19a_Teg102_sRZN_sRNA191 | Antisense | Predicted_toxin-antitoxin_module | Pinel-Marie_et_al._2014,_Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2270 | sRNA192 | 1007117 | 1007336 | - | 220 | sRNA192 | ND | Show | ||
srn_2280 | Sau6751 | 1012713 | 1012763 | - | 51 | Sau6751 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2290 | sbrA | 1012840 | 1012987 | - | 148 | RsaOO_sbrA_Teg54_sRZN | Transcript | Trans-encoded_sRNAs | Bohn_et_al._2010,_Nielsen_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2300 | sRNA193 | 1029807 | 1029980 | + | 174 | sRNA193 | ND | Show | ||
srn_2310 | sRNA194 | 1031383 | 1031556 | + | 174 | sRNA194 | ND | Show | ||
srn_2320 | sRNA195 | 1052755 | 1052956 | - | 202 | sRNA195_S414 | ND | Show | ||
srn_2330 | Sau11 | 1055914 | 1056066 | - | 153 | Sau11_Teg79_sRNA196 | Transcript | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show | |
srn_2335 | srn_2335_tsr18 | 1056692 | 1056902 | - | 211 | srn_2335_tsr18 | Transcript | Bronsard_et_al.2017 | Show | |
srn_2340 | Sau59 | 1057770 | 1057897 | - | 128 | Sau59 | Antisense | Cis-encoded_sRNA | Abu-Qatouseh_et_al._2010 | Show |
srn_2345 | tsr19 | 1062714 | 1062806 | - | 93 | tsr19 | ND | Show | ||
srn_2347 | srn_2347 | 1085712 | 1086023 | - | 312 | srn_2347 | Transcript | Bronsard_et_al.2017 | Show | |
srn_2348 | srn_2348 | 1085937 | 1086004 | + | 68 | srn_2348 | Antisense | Show | ||
srn_2350 | rsaOP | 1089149 | 1089566 | + | 418 | rsaOP | ND | Trans-encoded_sRNAs | Bohn_et_al._2010 | Show |
srn_2360 | sRNA197 | 1089192 | 1089223 | - | 32 | sRNA197 | ND | Show | ||
srn_2370 | Teg55 | 1090985 | 1091109 | + | 125 | Teg55_sRNA198 | 5'UTR | Potential_5'UTRs_and_3'UTRs | Beaume_et_al._2010 | Show |
srn_2380 | sRNA199 | 1092495 | 1092687 | - | 193 | sRNA199 | ND | Show | ||
srn_2390 | sRNA200 | 1095744 | 1096023 | - | 280 | sRNA200 | 5'UTR | Show | ||
srn_2400 | Teg37as | 1100663 | 1100771 | - | 109 | Teg37as | Antisense | Beaume_et_al._2010 | Show | |
srn_2410 | Sau6524 | 1102590 | 1102762 | + | 173 | Sau6524 | Antisense | Abu-Qatouseh_et_al._2010 | Show | |
srn_2420 | sRNA201 | 1107449 | 1107719 | + | 271 | sRNA201 | ND | Show | ||
srn_2430 | sRNA202 | 1111333 | 1111596 | - | 264 | sRNA202 | ND | Show | ||
srn_2440 | Teg56 | 1113976 | 1114200 | + | 225 | Teg56_sRNA203 | 5'UTR | T-box_uptream_of_pheS | Beaume_et_al._2010 | Show |
srn_2450 | Sau6229 | 1127112 | 1127350 | + | 239 | Sau6229_Teg57_sRNA204 | CDS | Potential_5'UTRs_and_3'UTRs | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2460 | Teg58 | 1133633 | 1133795 | + | 163 | Teg58 | Transcript | Beaume_et_al._2010 | Show | |
srn_1930.4 | tsr20 | 1136862 | 1137248 | - | 387 | rsaOF_Teg12_tsr20 | ND | Show | ||
srn_2465 | tsr21 | 1137502 | 1138676 | - | 1174 | tsr21 | CDS | Show | ||
srn_2467 | srn_2467 | 1137978 | 1138182 | - | 205 | srn_2467 | Antisense | Show | ||
srn_2468 | srn_2468 | 1137994 | 1138199 | + | 206 | srn_2468 | Transcript | Show | ||
srn_2470 | Teg31as | 1140380 | 1140445 | - | 66 | Teg31as | ND | Beaume_et_al._2010 | Show | |
srn_2480 | sRNA205 | 1141521 | 1141841 | - | 321 | sRNA205 | 5'UTR | Show | ||
srn_2490 | sRNA206 | 1141868 | 1142039 | + | 172 | sRNA206 | 5'UTR | Show | ||
srn_2500 | sRNA207 | 1142591 | 1142913 | - | 323 | sRNA207 | Transcript | Show | ||
srn_1930.2 | rsaOF | 1142771 | 1142848 | + | 78 | rsaOF_Teg12 | ND | Marchais_et_al._2009_and_Beaume_et_al._2010 | Show | |
srn_2510 | Sau6297 | 1149474 | 1149563 | + | 90 | Sau6297 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2520 | Teg60 | 1150088 | 1150303 | + | 216 | Teg60_sRNA208_tsr22 | Transcript | Trans-encoded_sRNAs | Beaume_et_al._2010 | Show |
srn_2530 | sRNA209 | 1151888 | 1152191 | - | 304 | sRNA209 | ND | Show | ||
srn_2540 | sRNA210 | 1152397 | 1152502 | - | 106 | sRNA210 | ND | Show | ||
srn_2550 | Teg80 | 1171095 | 1171253 | + | 159 | Teg80_sRNA211 | Transcript | T-box_uptream_of_ileS | Beaume_et_al._2010 | Show |
srn_2560 | sRNA212 | 1177463 | 1177780 | + | 318 | sRNA212 | Transcript | Show | ||
srn_2570 | sRNA213 | 1186784 | 1187011 | - | 228 | sRNA213 | ND | Show | ||
srn_2580 | Teg103 | 1188004 | 1188148 | - | 145 | Teg103_sRNA214 | Transcript | Beaume_et_al._2010 | Show | |
srn_2590 | Sau46 | 1197207 | 1197271 | - | 65 | Sau46 | 3'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_2600 | sRNA215 | 1220197 | 1220259 | - | 63 | sRNA215 | ND | Show | ||
srn_2610 | Sau24 | 1225832 | 1225902 | + | 71 | Sau24_Teg81 | Transcript | Cis-acting_regulators | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2620 | Teg61 | 1245093 | 1245202 | + | 110 | Teg61_sRNA216 | 5'UTR | Potential_5'UTRs_and_3'UTRs | Beaume_et_al._2010 | Show |
srn_2630 | sRNA217 | 1245362 | 1245447 | - | 86 | sRNA217 | ND | Show | ||
srn_2640 | Sau6554 | 1256521 | 1256621 | - | 101 | Sau6554 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2650 | sRNA218 | 1265492 | 1265714 | - | 223 | sRNA218 | ND | Show | ||
srn_2660 | sRNA219 | 1266166 | 1266313 | + | 148 | sRNA219 | Transcript | Show | ||
srn_2670 | Sau12 | 1280994 | 1281105 | - | 112 | Sau12 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2680 | Sau6041 | 1281678 | 1281748 | + | 71 | Sau6041 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2690 | Sau27 | 1283539 | 1283629 | + | 91 | Sau27 | Transcript | Trans-encoded_sRNAs | Abu-Qatouseh_et_al._2010 | Show |
srn_2700 | Teg62 | 1296598 | 1296683 | + | 86 | Teg62_sRNA220 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_2710 | Sau6710 | 1297717 | 1297776 | - | 60 | Sau6710 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2720 | Teg104 | 1299165 | 1299246 | + | 82 | Teg104_sRNA221 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_2730 | Teg106 | 1312229 | 1312275 | + | 47 | Teg106 | 3'UTR | Beaume_et_al._2010 | Show | |
srn_2740 | Teg108 | 1312382 | 1312479 | - | 98 | Teg108_sRNA222 | Transcript | Beaume_et_al._2010 | Show | |
srn_2750 | sRNA223 | 1314096 | 1314305 | + | 210 | sRNA223 | ND | Show | ||
srn_2760 | Sau85 | 1314328 | 1314379 | + | 52 | Sau85 | 3'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_2770 | Sau6904 | 1318129 | 1318171 | - | 43 | Sau6904 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2780 | Sau6282 | 1323006 | 1323075 | - | 70 | Sau6282 | 5'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_2790 | sRNA224 | 1323060 | 1323276 | + | 217 | sRNA224 | 5'UTR | Show | ||
srn_2800 | Sau14 | 1326513 | 1326611 | - | 99 | Sau14 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2810 | Sau6742 | 1332388 | 1332485 | - | 98 | Sau6742 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2820 | Teg110 | 1334633 | 1334669 | + | 37 | Teg110_sRNA225 | 3'UTR | Beaume_et_al._2010 | Show | |
srn_2830 | SbrB | 1336775 | 1336892 | + | 118 | SbrB_Teg111 | Transcript | Potential_small_CDSs | Nielsen_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2840 | sRNA226 | 1348843 | 1348964 | + | 122 | sRNA226 | ND | Show | ||
srn_2850 | Teg112 | 1358760 | 1359012 | + | 253 | Teg112_sRNA227 | 3'UTR | Beaume_et_al._2010 | Show | |
srn_2860 | sRNA229 | 1367858 | 1367936 | - | 79 | sRNA229 | ND | Show | ||
srn_2870 | Sau28 | 1372121 | 1372229 | - | 109 | Sau28 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2880 | RsaOQ | 1372136 | 1372501 | + | 366 | RsaOQ_Teg82_IGR23_sRNA230 | Transcript | Cis-acting_regulators | Bohn_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_2890 | Sau72 | 1375114 | 1375238 | - | 125 | Sau72 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2900 | Teg113 | 1378945 | 1378990 | + | 46 | Teg113_sRNA231 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_2910 | Teg63 | 1379040 | 1379184 | + | 145 | Teg63_sRNA232 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_2920 | Sau6318 | 1385871 | 1385925 | + | 55 | Sau6318 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_2930 | sRNA233 | 1395283 | 1395380 | + | 98 | sRNA233 | ND | Show | ||
srn_2940 | sRNA233 | 1398977 | 1399074 | + | 98 | sRNA233 | 3'UTR | Show | ||
srn_2950 | Teg6 | 1399488 | 1399659 | + | 172 | Teg6_sRNA234 | Transcript | Lysine_riboswitch_upstream_of_lysC | Beaume_et_al._2010 | Show |
srn_2960 | Sau6528 | 1417793 | 1417891 | - | 99 | Sau6528 | 3'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_2970 | sRNA235 | 1418094 | 1418333 | + | 240 | sRNA235 | ND | Show | ||
srn_2975 | tsr25 | 1424781 | 1424961 | + | 181 | tsr25_S596 | Transcript | Show | ||
srn_2980 | sRNA238 | 1426860 | 1427114 | + | 255 | sRNA238 | ND | Show | ||
srn_2990 | Sau17 | 1459877 | 1459928 | + | 52 | Sau17 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3000 | Sau6863 | 1476898 | 1476950 | + | 53 | Sau6863 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3010 | Teg64 | 1480178 | 1480263 | - | 86 | Teg64_sRNA239 | 5'UTR | Beaume_et_al._2010 | Show | |
RNAseP | RNAseP | 1483578 | 1484012 | - | 435 | RseP_rnp_IGR1215_sRNA240 | Transcript | Trans-encoded_sRNAs | Show | |
srn_3020 | Teg65 | 1483781 | 1483862 | + | 82 | Teg65_sRNA241 | Antisense | Beaume_et_al._2010 | Show | |
srn_3030 | Sau6387 | 1499901 | 1499935 | - | 35 | Sau6387 | 3'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_3040 | Sau50 | 1510745 | 1510892 | + | 148 | Sau50 | Antisense | Cis-encoded_sRNA | Abu-Qatouseh_et_al._2010 | Show |
srn_3050 | sRNA242 | 1514719 | 1514881 | + | 163 | sRNA242 | Antisense | Show | ||
srn_3060 | sRNA243 | 1522540 | 1522723 | + | 184 | sRNA243 | 5'UTR | Show | ||
srn_3070 | Sau6889 | 1523116 | 1523179 | - | 64 | Sau6889 | 3'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_3080 | Teg66 | 1523788 | 1523922 | - | 135 | Teg66_sRNA244 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_3090 | sRNA245 | 1532292 | 1532451 | + | 160 | sRNA245 | ND | Show | ||
srn_3100 | sRNA246 | 1535197 | 1535443 | + | 247 | sRNA246 | ND | Show | ||
srn_3110 | Sau6353 | 1539239 | 1539314 | - | 76 | Sau6353_sRNA247 | Transcript | Abu-Qatouseh_et_al._2010 | Show | |
srn_3120 | Sau6405 | 1539463 | 1539550 | + | 88 | Sau6405 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3130 | Teg116 | 1544189 | 1544243 | - | 55 | Teg116 | ND | Beaume_et_al._2010 | Show | |
srn_3140 | Teg151 | 1553603 | 1553738 | + | 136 | Teg151 | Transcript | Beaume_et_al._2010 | Show | |
srn_3150 | Teg83 | 1576828 | 1576950 | - | 123 | Teg83_sRNA249 | 3'UTR | Beaume_et_al._2010 | Show | |
srn_3160 | RsaOD | 1600161 | 1600375 | + | 215 | RsaOD_Teg67_sRNA250 | 5'UTR | Cis-acting_regulators | Marchais_et_al._2009_and_Beaume_et_al._2010 | Show |
srn_3170 | Sau6463 | 1633706 | 1633755 | + | 50 | Sau6463 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3180 | Sau6940 | 1640040 | 1640109 | + | 70 | Sau6940 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3185 | tsr28 | 1640358 | 1640433 | - | 76 | tsr28 | CDS | Show | ||
srn_3190 | Teg68 | 1649293 | 1649487 | - | 195 | Teg68_sRNA252 | Transcript | T-box_uptream_of_alaS | Beaume_et_al._2010 | Show |
srn_3200 | sRNA253 | 1650834 | 1651029 | + | 196 | sRNA253 | ND | Show | ||
srn_3210 | sRNA254 | 1652806 | 1652961 | - | 156 | sRNA254 | Transcript | Show | ||
srn_3220 | sRNA254 | 1653138 | 1653326 | - | 189 | sRNA254 | 3'UTR | Show | ||
srn_3230 | Sau6936 | 1657705 | 1657755 | + | 51 | Sau6936 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3240 | sRNA255 | 1659786 | 1660002 | + | 217 | sRNA255 | ND | Show | ||
6S | 6S | 1660508 | 1660725 | - | 218 | Teg97_WAN01CC8T_ssrS_ssr80_IGR2_6S_sRNA256 | Transcript | Beaume_et_al._2010_and_Roberts_et_al._2006 | Show | |
srn_3260 | Teg69 | 1663972 | 1664244 | - | 273 | Teg69_sRNA257 | Transcript | T-box_uptream_of_hisS | Beaume_et_al._2010 | Show |
srn_3270 | sRNA259 | 1682747 | 1682986 | - | 240 | sRNA259 | 3'UTR | Show | ||
srn_3280 | sRNA260 | 1683588 | 1683846 | + | 259 | sRNA260 | 5'UTR | Show | ||
srn_3290 | sRNA261 | 1685624 | 1685839 | + | 216 | sRNA261 | 5'UTR | Show | ||
srn_3300 | Teg70 | 1696567 | 1696914 | - | 348 | Teg70_sRNA262 | Transcript | T-box_uptream_of_valS | Beaume_et_al._2010 | Show |
srn_3310 | sRNA263 | 1711925 | 1712092 | - | 168 | sRNA263 | 3'UTR | Show | ||
srn_3320 | sRNA264 | 1713708 | 1713990 | - | 283 | sRNA264 | 3'UTR | Show | ||
srn_3330 | Teg71 | 1716138 | 1716326 | - | 189 | Teg71_sRNA265 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_3340 | Teg72 | 1726649 | 1726796 | - | 148 | Teg72 | 5'UTR | Potential_5'UTRs_and_3'UTRs | Beaume_et_al._2010 | Show |
srn_3350 | sRNA266 | 1728707 | 1728952 | + | 246 | sRNA266 | ND | Show | ||
srn_3360 | sRNA267 | 1740502 | 1740784 | - | 283 | sRNA267 | ND | Show | ||
srn_3370 | RsaOW5 | 1761595 | 1761712 | - | 118 | RsaOW5_Teg11 | ND | Bohn_et_al._2010_and_Beaume_et_al._2010 | Show | |
srn_3380 | Teg32as | 1763004 | 1763074 | - | 71 | Teg32as | ND | Beaume_et_al._2010 | Show | |
srn_3390 | Teg7 | 1773896 | 1774088 | - | 193 | Teg7_sRNA268 | Transcript | Beaume_et_al._2010 | Show | |
srn_3400 | sRNA269 | 1776924 | 1777161 | + | 238 | sRNA269 | ND | Show | ||
srn_3410 | rsaB | 1778009 | 1778065 | + | 57 | rsaB | ND | Show | ||
srn_3420 | Teg89 | 1778207 | 1778285 | - | 79 | Teg89_sRNA270 | 3'UTR | Beaume_et_al._2010 | Show | |
srn_3430 | sRNA271 | 1780226 | 1780397 | - | 172 | sRNA271 | 3'UTR | Show | ||
srn_3440 | Sau6128 | 1787402 | 1787448 | - | 47 | Sau6128 | 3'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_3450 | Sau84 | 1790712 | 1790799 | + | 88 | Sau84 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3460 | Sau5949 | 1799346 | 1799451 | + | 106 | Sau5949_Teg120_sRNA272 | Transcript | Trans-encoded_sRNAs | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_3470 | sRNA274 | 1801012 | 1801378 | - | 367 | sRNA274_S736 | 5'UTR | Show | ||
srn_3480 | sRNA275 | 1803917 | 1804324 | - | 408 | sRNA275 | 3'UTR | Show | ||
srn_3490 | RsaOE | 1818597 | 1818816 | - | 220 | RsaOE_Teg73_sRNA276 | Transcript | Cis-acting_regulators | Marchais_et_al._2009_and_Beaume_et_al._2010 | Show |
srn_3500 | sRNA277 | 1822214 | 1822457 | - | 244 | sRNA277 | ND | Show | ||
srn_3510 | Teg74 | 1828317 | 1828617 | - | 301 | Teg74_sRNA278 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_3520 | sRNA279 | 1830807 | 1831139 | + | 333 | sRNA279 | CDS | Show | ||
srn_3530 | sRNA281 | 1835614 | 1835879 | - | 266 | sRNA281 | ND | Show | ||
srn_3540 | sRNA280 | 1839147 | 1839421 | + | 275 | sRNA280 | ND | Show | ||
srn_3550 | Teg75 | 1844482 | 1844626 | - | 145 | Teg75_sRNA282 | Transcript | Beaume_et_al._2010 | Show | |
srn_3560 | sRNA283 | 1846835 | 1846984 | + | 150 | sRNA283 | ND | Show | ||
srn_3570 | sRNA284 | 1855965 | 1856311 | - | 347 | sRNA284 | ND | Show | ||
srn_3580 | SprA1 | 1856486 | 1856692 | + | 207 | sprA1_IGR1520_Teg8_sRNA285 | Transcript | encode_peptide_toxin-antoxin_module | Pichon_et_Felden._2005,_Roberts_et_al._2006_and_Beaume_et_al._2010 | Show |
srn_3590 | sprAs1 | 1856657 | 1856713 | - | 57 | sprAs1_Teg152_sRNA286 | Antisense | cis-encoded_Antisense_sRNA_acting_in_transtoxin-antoxin_module | Beaume_et_al._2010 | Show |
srn_3600 | SprB | 1866771 | 1866886 | - | 116 | SprB_Teg9_IGR18 | Transcript | Trans-encoded_sRNAs | Pichon_et_Felden._2005_and_Beaume_et_al._2010 | Show |
srn_3610 | SprC | 1871690 | 1871831 | - | 142 | SprC_Teg10_IGR18 | Transcript | Trans-encoded_sRNAs | Pichon_et_Felden._2005_and_Beaume_et_al._2010 | Show |
srn_3620 | Sau7005 | 1884875 | 1884949 | + | 75 | Sau7005 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3630 | Sau69 | 1892579 | 1892676 | + | 98 | Sau69 | 5'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_3640 | sRNA288 | 1898859 | 1899065 | - | 207 | sRNA288 | 5'UTR | Show | ||
srn_3650 | sRNA289 | 1901972 | 1902197 | - | 226 | sRNA289 | 5'UTR | Show | ||
srn_3660 | Sau6515 | 1903524 | 1903736 | + | 213 | Sau6515 | Antisense | Abu-Qatouseh_et_al._2010 | Show | |
srn_3670 | Sau6930 | 1907919 | 1907996 | - | 78 | Sau6930 | 3'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_3680 | sRNA290 | 1910325 | 1910573 | + | 249 | sRNA290 | ND | Show | ||
srn_3690 | rsaOW6 | 1914223 | 1914595 | - | 373 | rsaOW6 | ND | Bohn_et_al._2010 | Show | |
srn_3700 | Teg142 | 1914748 | 1914804 | - | 57 | Teg142_sRNA291 | Transcript | Beaume_et_al._2010 | Show | |
srn_3710 | Sau6799 | 1934602 | 1934669 | - | 68 | Sau6799 | Transcript | Abu-Qatouseh_et_al._2010 | Show | |
srn_1930.3 | rsaOF | 1950557 | 1950686 | + | 130 | rsaOF_Teg12 | 3'UTR | Marchais_et_al._2009_and_Beaume_et_al._2010 | Show | |
srn_3720 | Teg121 | 1961982 | 1962027 | + | 46 | Teg121 | ND | Beaume_et_al._2010 | Show | |
srn_3730 | sRNA297 | 1973929 | 1974153 | + | 225 | sRNA297 | ND | Show | ||
srn_3740 | Sau6492 | 1974379 | 1974509 | + | 131 | Sau6492 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3750 | Sau6291 | 1979747 | 1979820 | + | 74 | Sau6291 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3760 | Sau7009 | 1996360 | 1996409 | - | 50 | Sau7009 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_3765 | srn_3765 | 2000663 | 2000939 | - | 277 | srn_3765 | Transcript | Bronsard_et_al.2017 | Show | |
srn_3770 | Teg122 | 2001089 | 2001140 | + | 52 | Teg122_sRNA303 | ND | Beaume_et_al._2010 | Show | |
srn_3780 | Teg13 | 2001165 | 2001312 | - | 148 | Teg13_sRNA302 | Transcript | Beaume_et_al._2010 | Show | |
srn_3790 | sRNA301 | 2005631 | 2006162 | + | 532 | sRNA301 | Transcript | Show | ||
srn_3800 | sprD | 2007034 | 2007178 | - | 145 | sprD_Teg14_sRNA300 | Transcript | Trans-encoded_sRNAs | Pichon_et_Felden._2005_and_Beaume_et_al._2010 | Show |
srn_3810 | Teg124 | 2007253 | 2007312 | - | 60 | Teg124 | ND | Beaume_et_al._2010 | Show | |
srn_3820 | SprX | 2008644 | 2008789 | - | 146 | RsaOR_SprX_ssr6_teg15_IGR12_sRNA299 | Transcript | Trans-encoded_sRNAs | Eyraud_A_et_al.2014,_Bohn_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_3830 | sprF1 | 2010876 | 2011013 | + | 138 | sprF1_IGR1644_Teg154_sRNA309 | Transcript | Type_I_toxin-antitoxin_module | Pinel-Marie_et_al._2014,_Roberts_et_al._2006_and_Beaume_et_al._2010 | Show |
srn_3840 | sprG1 | 2010877 | 2011315 | - | 439 | sprG1_sRNA310 | Transcript | Type_I_toxin-antitoxin_module | Pinel-Marie_et_al._2014 | Show |
srn_3850 | Teg123 | 2041764 | 2041827 | + | 64 | Teg123_sRNA294 | ND | Beaume_et_al._2010 | Show | |
srn_3860 | sRNA315 | 2046772 | 2046893 | + | 122 | sRNA315 | Transcript | Show | ||
srn_3870 | sRNA296 | 2054568 | 2054750 | + | 183 | sRNA296 | Transcript | Show | ||
srn_3880 | Teg124 | 2059365 | 2059473 | - | 109 | Teg124 | ND | Beaume_et_al._2010 | Show | |
srn_3890 | Teg21as | 2064507 | 2064570 | + | 64 | Teg21as | ND | Beaume_et_al._2010 | Show | |
srn_3900 | Teg22as | 2069004 | 2069067 | + | 64 | Teg22as | ND | Beaume_et_al._2010 | Show | |
srn_3910 | RNAIII | 2078730 | 2079245 | - | 516 | RNAIII_sRNA317 | Transcript | Trans-encoded_sRNAs | Show | |
srn_3920 | Teg23as | 2086503 | 2086539 | + | 37 | Teg23as | ND | Beaume_et_al._2010 | Show | |
srn_3930 | sRNA319 | 2087949 | 2088174 | + | 226 | sRNA319 | ND | Show | ||
srn_3940 | sRNA320 | 2095932 | 2095998 | + | 67 | sRNA320 | ND | Show | ||
srn_3950 | Teg16 | 2097285 | 2097509 | + | 225 | Teg16_sRNA321 | Transcript | Beaume_et_al._2010 | Show | |
srn_3960 | sRNA323 | 2113612 | 2113795 | + | 184 | sRNA323 | ND | Show | ||
srn_3970 | Sau6929 | 2115619 | 2115715 | - | 97 | Sau6929 | CDS | Abu-Qatouseh_et_al._2010 | Show | |
srn_3980 | sRNA324 | 2139949 | 2140114 | + | 166 | sRNA324 | ND | Show | ||
srn_3990 | Teg125 | 2145871 | 2145903 | + | 33 | Teg125_sRNA325 | 3'UTR | Beaume_et_al._2010 | Show | |
srn_4000 | sRNA326 | 2173297 | 2173549 | + | 253 | sRNA326 | Antisense | Show | ||
srn_4010 | sRNA327 | 2179541 | 2179739 | + | 199 | sRNA327 | ND | Show | ||
srn_4015 | tsr31 | 2179622 | 2179693 | - | 72 | tsr31 | ND | Show | ||
srn_4020 | sRNA328 | 2181441 | 2181608 | - | 168 | sRNA328 | ND | Show | ||
srn_4030 | sRNA329 | 2184831 | 2184980 | + | 150 | sRNA329 | ND | Show | ||
srn_4040 | Sau6469 | 2185369 | 2185438 | + | 70 | Sau6469 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4050 | artR | 2186677 | 2187022 | - | 346 | artR | ND | Xue_et_al,_2013 | Show | |
srn_4060 | Sau6723 | 2187838 | 2187916 | + | 79 | Sau6723 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4070 | sRNA330 | 2191932 | 2192075 | + | 144 | sRNA330 | ND | Show | ||
srn_4080 | sRNA331 | 2193873 | 2193942 | - | 70 | sRNA331 | 5'UTR | Show | ||
srn_4090 | sprF3 | 2206381 | 2206552 | + | 172 | sprF3_Teg19a_RsaOS_sRNA333 | Antisense | Predicted_toxin-antitoxin_module | Pinel-Marie_et_al._2014_and_Beaume_et_al._2010 | Show |
srn_4100 | sprG3 | 2206452 | 2206706 | - | 255 | sprG3_Teg102_Teg19b_sRNA333 | Transcript | Predicted_toxin-antitoxin_module | Pinel-Marie_et_al._2014_and_Beaume_et_al._2010 | Show |
srn_4110 | sRNA335 | 2208731 | 2208928 | + | 198 | sRNA335 | ND | Show | ||
srn_4120 | Teg20 | 2212174 | 2212322 | - | 149 | Teg20_sRNA336 | Transcript | Beaume_et_al._2010 | Show | |
srn_4130 | Teg21 | 2225573 | 2225691 | - | 119 | Teg21 | ND | Potential_5'UTRs_and_3'UTRs | Beaume_et_al._2010 | Show |
srn_4140 | sRNA338 | 2232126 | 2232193 | + | 68 | sRNA338 | ND | Show | ||
srn_4150 | sRNA339 | 2233346 | 2233400 | + | 55 | sRNA339 | ND | Show | ||
srn_4160 | Sau25 | 2235878 | 2236044 | - | 167 | Sau25_sRNA340 | Transcript | Abu-Qatouseh_et_al._2010 | Show | |
srn_4170 | Sau23 | 2254354 | 2254407 | - | 54 | Sau23 | Transcript | Abu-Qatouseh_et_al._2010 | Show | |
srn_4180 | sRNA341 | 2255442 | 2255552 | + | 111 | sRNA341 | ND | Show | ||
srn_4190 | sRNA342 | 2256424 | 2256682 | + | 259 | sRNA342 | Antisense | Show | ||
srn_4200 | sRNA343 | 2268779 | 2268991 | + | 213 | sRNA343 | ND | Show | ||
srn_4205 | tsr32 | 2273423 | 2273573 | + | 151 | tsr32 | ND | Show | ||
srn_4210 | Teg22 | 2282441 | 2282535 | - | 95 | Teg22 | 3'UTR | Beaume_et_al._2010 | Show | |
srn_4220 | sRNA345 | 2289802 | 2289888 | - | 87 | sRNA345 | ND | Show | ||
srn_4230 | sRNA344 | 2289832 | 2289871 | + | 40 | sRNA344 | ND | Show | ||
srn_4240 | Teg84 | 2290784 | 2290862 | - | 79 | Teg84_sRNA346 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_4250 | Sau31 | 2293496 | 2293560 | + | 65 | Sau31 | ND | Cis-encoded_sRNA | Abu-Qatouseh_et_al._2010 | Show |
srn_4260 | Sau30 | 2294537 | 2294600 | - | 64 | Sau30_SSR154_sRZI | Transcript | Trans-encoded_sRNAs | Abu-Qatouseh_et_al._2010 | Show |
srn_4270 | sRNA347 | 2294569 | 2294659 | + | 91 | sRNA347 | ND | Show | ||
srn_4280 | Sau73 | 2308443 | 2308532 | + | 90 | Sau73 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4290 | sRNA348 | 2322791 | 2322869 | + | 79 | sRNA348 | Transcript | Show | ||
srn_4300 | sRNA349 | 2326237 | 2326500 | + | 264 | sRNA349 | ND | Show | ||
srn_4310 | Sau6715 | 2340532 | 2340578 | + | 47 | Sau6715 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4320 | sRNA350 | 2343610 | 2343745 | - | 136 | sRNA350 | ND | Show | ||
srn_4325 | tsr33 | 2347961 | 2348045 | - | 85 | tsr33 | 3'UTR | Show | ||
srn_4330 | Teg36as | 2352665 | 2353116 | - | 452 | Teg36as_sRNA351 | Antisense | Beaume_et_al._2010 | Show | |
srn_4340 | Teg23 | 2353495 | 2353801 | - | 307 | Teg23_sRNA352 | Transcript | Beaume_et_al._2010 | Show | |
srn_4350 | sRNA353 | 2357469 | 2357568 | - | 100 | sRNA353 | ND | Show | ||
srn_4360 | sRNA354 | 2361508 | 2361753 | + | 246 | sRNA354 | ND | Show | ||
srn_4370 | sRNA355 | 2365348 | 2365669 | - | 322 | sRNA355 | 5'UTR | Show | ||
srn_4380 | Sau92 | 2366380 | 2366427 | + | 48 | Sau92 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4390 | rsaOG | 2367940 | 2368050 | - | 111 | rsaOG_RsaI_Teg24_sRNA356 | Transcript | Trans-encoded_sRNAs | Marchais_et_al._2009_and_Beaume_et_al._2010 | Show |
srn_4400 | sRNA357 | 2376669 | 2376840 | + | 172 | sRNA357 | ND | Show | ||
srn_4410 | sRNA358 | 2380831 | 2380928 | + | 98 | sRNA358 | ND | Show | ||
srn_4420 | Teg25 | 2381531 | 2381651 | - | 121 | Teg25_sRNA359 | Transcript | Beaume_et_al._2010 | Show | |
srn_4430 | sRNA360 | 2387170 | 2387365 | + | 196 | sRNA360 | ND | Show | ||
srn_4440 | sRNA361 | 2414725 | 2414833 | - | 109 | sRNA361 | ND | Show | ||
srn_4450 | Sau6307 | 2418596 | 2418670 | - | 75 | Sau6307 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4460 | Teg26 | 2426271 | 2426436 | - | 166 | Teg26_sRNA362 | Transcript | Potential_5'UTRs_and_3'UTRs | Beaume_et_al._2010 | Show |
srn_4470 | RsaX28 | 2435872 | 2437048 | - | 1177 | RsaX28_Teg27_ssr42_sRNA363 | Transcript | Beaume_et_al._2010 | Show | |
srn_4480 | Teg126 | 2445502 | 2445592 | - | 91 | Teg126_sRNA364 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_4490 | sRNA365 | 2454905 | 2455133 | + | 229 | sRNA365 | ND | Show | ||
srn_4500 | Teg127 | 2464059 | 2464095 | + | 37 | Teg127 | ND | Beaume_et_al._2010 | Show | |
srn_4510 | Teg25as | 2469699 | 2469816 | + | 118 | Teg25as_sRNA366 | ND | Beaume_et_al._2010 | Show | |
srn_4520 | RsaX20 | 2473291 | 2473552 | + | 262 | RsaX20_Teg128_Teg130_sRNA367 | Transcript | Beaume_et_al._2010 | Show | |
srn_4530 | sprAs2prime | 2487032 | 2487086 | + | 55 | sprAs2prime_sRNA369 | Transcript | Show | ||
srn_4540 | sprAs2 | 2491304 | 2491365 | + | 62 | sprAs2_sRNA370 | Antisense | Show | ||
srn_4550 | sprA2 | 2491331 | 2491563 | - | 233 | WAN014FZW_sprA2_Teg26as_IGR2049_IGR8bis_sRNA371 | Transcript | Roberts_et_al.,_2006 | Show | |
srn_4560 | sRNA372 | 2492008 | 2492167 | - | 160 | sRNA372 | ND | Show | ||
srn_4570 | Teg27 | 2496487 | 2496577 | - | 91 | Teg27as_Teg27-ssr42_sRNA373 | Antisense | Beaume_et_al._2010 | Show | |
srn_4580 | sRNA374 | 2507136 | 2507399 | + | 264 | sRNA374 | ND | Show | ||
srn_4590 | Teg28 | 2513109 | 2513236 | - | 128 | Teg28_sRNA375 | Transcript | Potential_5'UTRs_and_3'UTRs | Beaume_et_al._2010 | Show |
srn_4600 | sRNA376 | 2513692 | 2513973 | + | 282 | sRNA376 | ND | Show | ||
srn_4605 | tsr34 | 2526596 | 2526645 | + | 50 | tsr34 | ND | Show | ||
srn_4610 | sRNA377 | 2526654 | 2526748 | - | 95 | sRNA377 | Transcript | Show | ||
srn_4620 | sRNA378 | 2532708 | 2532939 | + | 232 | sRNA378 | ND | Show | ||
srn_4630 | sRNA379 | 2535084 | 2535242 | + | 159 | sRNA379 | ND | Show | ||
srn_4635 | srn_4635_S1077 | 2536407 | 2536624 | - | 218 | srn_4635_S1077 | Transcript | Bronsard_et_al.2017 | Show | |
srn_4640 | Sau6488 | 2537975 | 2538038 | + | 64 | Sau6488 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4650 | Sau6902 | 2540312 | 2540381 | - | 70 | Sau6902 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4660 | sRNA380 | 2540816 | 2540993 | - | 178 | sRNA380 | 5'UTR | Show | ||
srn_4665 | tsr35 | 2543813 | 2544360 | + | 548 | tsr35 | CDS | Show | ||
srn_4666 | tsr36 | 2543886 | 2544411 | - | 526 | tsr36 | ND | Show | ||
srn_4670 | RsaOT | 2544429 | 2544574 | + | 146 | RsaOT_RsaON_Teg29_ssr43_sRNA381 | Transcript | Trans-encoded_sRNAs | Bohn_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_4680 | Sau19 | 2544997 | 2545071 | + | 75 | Sau19_RsaX21_Teg131_sRNA382 | Transcript | Trans-encoded_sRNAs | Abu-Qatouseh_et_al._2010_and_Beaume_et_al._2010 | Show |
srn_4690 | Teg132 | 2551482 | 2551518 | - | 37 | Teg132 | ND | Beaume_et_al._2010 | Show | |
srn_4700 | Sau6987 | 2554918 | 2555019 | - | 102 | Sau6987 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4705 | tsr37 | 2557085 | 2557421 | + | 337 | tsr37 | CDS | Show | ||
srn_4710 | Teg34 | 2559622 | 2563843 | - | 4222 | Teg34 | CDS | Beaume_et_al._2010 | Show | |
srn_4720 | sRNA383 | 2570685 | 2571184 | + | 500 | sRNA383 | ND | Show | ||
srn_4730 | sRNA383 | 2574696 | 2574978 | + | 283 | sRNA383 | ND | Show | ||
srn_4740 | sprA3 | 2590756 | 2590985 | + | 230 | sprA3_IGR2125 | ND | Show | ||
srn_4750 | sRNA384 | 2590868 | 2590983 | - | 116 | sRNA384 | ND | Show | ||
srn_4760 | RsaX23 | 2590925 | 2590989 | - | 65 | RsaX23_Teg153 | ND | Beaume_et_al._2010 | Show | |
srn_4770 | sRNA385 | 2602201 | 2602632 | + | 432 | sRNA385 | 3'UTR | Show | ||
srn_4780 | Teg31 | 2602394 | 2602508 | - | 115 | Teg31_sRNA386 | ND | Beaume_et_al._2010 | Show | |
srn_4790 | sRNA387 | 2605838 | 2606142 | + | 305 | sRNA387 | CDS | Show | ||
srn_4800 | rsaOU | 2611619 | 2611918 | + | 300 | rsaOU_sRZG | ND | Cis-acting_regulators | Bohn_et_al._2010 | Show |
srn_4810 | sRNA388 | 2613018 | 2613219 | + | 202 | sRNA388 | ND | Show | ||
srn_4820 | Sau6648 | 2613760 | 2613833 | + | 74 | Sau6648 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4830 | Sau6072 | 2616017 | 2616311 | + | 295 | Sau6072_sRNA389 | Antisense | Trans-encoded_sRNAs | Abu-Qatouseh_et_al._2010 | Show |
srn_4840 | RsaOV | 2632138 | 2632192 | + | 55 | RsaOV_Sau40_sRZV | ND | Trans-encoded_sRNAs | Bohn_et_al._2010_and_Abu-Qatouseh_et_al._2010 | Show |
srn_4850 | Sau6416 | 2635763 | 2635839 | + | 77 | Sau6416 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4860 | sRNA391 | 2637050 | 2637239 | + | 190 | sRNA391 | ND | Show | ||
srn_4870 | Sau6909 | 2642081 | 2642132 | + | 52 | Sau6909 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4880 | Sau6745 | 2650374 | 2650429 | + | 56 | Sau6745 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4890 | Teg134 | 2650556 | 2650637 | - | 82 | Teg134_sRNA392 | 5'UTR | Beaume_et_al._2010 | Show | |
srn_4900 | sRNA394 | 2661868 | 2662110 | + | 243 | sRNA394 | ND | Show | ||
srn_4910 | sRNA395 | 2663571 | 2663751 | + | 181 | sRNA395 | ND | Show | ||
srn_4920 | Sau39 | 2666976 | 2667028 | - | 53 | Sau39 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4930 | Sau6872 | 2668405 | 2668515 | - | 111 | Sau6872 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4940 | sRNA396 | 2687440 | 2687749 | + | 310 | sRNA396 | CDS | Show | ||
srn_4950 | sRNA397 | 2690952 | 2691271 | + | 320 | sRNA397 | CDS | Show | ||
srn_4960 | Sau6590 | 2702834 | 2702885 | + | 52 | Sau6590 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_4970 | sRNA398 | 2708872 | 2709015 | - | 144 | sRNA398 | 5'UTR | Show | ||
srn_4980 | Teg32 | 2709729 | 2709952 | - | 224 | Teg32_sRNA399 | Transcript | Beaume_et_al._2010 | Show | |
srn_4990 | Sau34 | 2711136 | 2711212 | + | 77 | Sau34 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_5000 | Sau13 | 2715794 | 2715897 | - | 104 | Sau13 | ND | Cis-encoded_sRNA | Abu-Qatouseh_et_al._2010 | Show |
srn_5010 | Teg33 | 2716445 | 2716640 | - | 196 | Teg33_sRNA400 | Transcript | Beaume_et_al._2010 | Show | |
srn_5020 | sRNA401 | 2721621 | 2722188 | + | 568 | sRNA401 | Antisense | Show | ||
srn_5030 | Sau37 | 2735635 | 2735707 | - | 73 | Sau37 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_5040 | sRNA403 | 2742022 | 2742159 | + | 138 | sRNA403 | ND | Show | ||
srn_5050 | Teg28as | 2745604 | 2745640 | + | 37 | Teg28as_sRNA404 | ND | Beaume_et_al._2010 | Show | |
srn_5055 | tsr39 | 2755164 | 2755216 | - | 53 | tsr39 | ND | Show | ||
srn_5060 | sRNA405 | 2758416 | 2758704 | + | 289 | sRNA405 | ND | Show | ||
srn_5070 | RsaX25 | 2769394 | 2769772 | - | 379 | RsaX25_Teg141_sRNA406 | Transcript | Beaume_et_al._2010 | Show | |
srn_5075 | srn_5075 | 2776887 | 2777108 | - | 222 | srn_5075 | Transcript | Show | ||
srn_5080 | Sau6518 | 2785155 | 2785200 | + | 46 | Sau6518 | ND | Abu-Qatouseh_et_al._2010 | Show | |
srn_5090 | sRNA408 | 2790652 | 2790803 | + | 152 | sRNA408 | 5'UTR | Show | ||
srn_5100 | sRNA410 | 2797971 | 2798125 | + | 155 | sRNA410 | ND | Show | ||
srn_5110 | sRNA411 | 2805945 | 2806106 | - | 162 | sRNA411 | ND | Show | ||
srn_5120 | Sau5995 | 2806376 | 2806468 | + | 93 | Sau5995 | 5'UTR | Abu-Qatouseh_et_al._2010 | Show | |
srn_5130 | Sau6728 | 2809754 | 2809831 | + | 78 | Sau6728 | ND | Abu-Qatouseh_et_al._2010 | Show |
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