Staphylococcus aureus str XN108

The prediction was done using a set of srn genes identified from SRD RNA-seq analysis.
Numbers of SRD’S predicted srn sequences =
subject_seq_id identity length mismatch gapopen query_start query_end subject_start subject_end evalue bitscore
srn_4470_RsaX2899.9211771026622492663425111770.0 2169
srn_1670_Teg20as99.70100930765207766215110090.0 1847
srn_0770_Teg18as99.088658034208234294618650.0 1554
srn_1580_sbrC99.26675507283117289851207940.0 1219
srn_5020_sRNA40199.65568202954026295459315680.0 1038
srn_3790_sRNA30199.62532202120384212091515320.0 972
srn_3910_RNAIII100.00516002183338218385315160.0 953
srn_1590_rsaC100.005050072848172898515050.0 933
srn_2130_rsaE99.13459401030681103113914590.0 826
srn_4330_Teg36as99.12452402577606257805714520.0 813
RNaseP100.00435001545226154566014350.0 804
srn_0860_RsaOB99.764211042774142816114210.0 773
srn_5070_RsaX2598.68379503000796300117413790.0 673
srn_2880_RsaOQ99.73366101433366143373113660.0 671
srn_2250_sprG499.46369111061831106219813690.0 669
srn_3840_sprG198.91366402124911212527623670.0 654
tmRNA98.893594089317489353213590.0 641
srn_4050_artR99.71346102414467241481213460.0 634
srn_3300_Teg7099.43348111758325175867113481e-179 630
srn_0280_sRNA1696.7737212010486210523313727e-177 621
srn_2560_sRNA21299.37319021234026123434313181e-163 577
srn_4340_Teg23100.00307002578434257874013079e-161 568
srn_4770_sRNA38595.7535310128226662823018854321e-159 564
srn_9500_sRNA368100.00302002702056270235713025e-158 558
srn_1990_Teg40as100.003000090875890905713007e-157 555
srn_2530_sRNA20999.34304201208458120876113049e-156 551
srn_4830_Sau607298.98295302836398283669212954e-149 529
srn_1350_Teg4599.312911161451561480412915e-148 525
srn_3360_sRNA267100.00283001804236180451812832e-147 523
srn_3320_sRNA264100.00283001775464177574612832e-147 523
srn_3260_Teg6999.63273101725833172610512733e-140 499
srn_9360_sRNA29398.53272312037821203809227114e-134 479
srn_4520_RsaX2099.24262202699757270001812622e-132 473
srn_4190_sRNA34299.61259012482604248286112597e-132 472
srn_4000_sRNA326100.00253002401090240134212539e-131 468
srn_3280_sRNA26099.23259201745383174564112599e-131 468
4.5S100.002530054790154815312539e-131 468
srn_3570_sRNA28496.75277901921786192206212774e-129 462
srn_3570_sRNA28494.877840192212119221982703478e-27 122
srn_4100_sprG399.22256112427598242785312552e-128 460
srn_3350_sRNA266100.00246001790461179070612467e-127 455
srn_2970_sRNA235100.00240001479473147971212402e-123 444
srn_2230_sprG299.17241111061575106181412413e-120 433
srn_2450_Sau622999.16239201183793118403112391e-119 431
srn_3950_Teg16100.00225002327185232740912253e-115 416
srn_4550_sprA298.71233302717843271807512331e-114 414
srn_0930_Teg76100.002230044950944973112234e-114 412
srn_3490_RsaOE100.00220001880965188118412202e-112 407
6S100.00218001722369172258612183e-111 403
srn_0030_Teg3599.1122502124871271012243e-111 403
srn_1490_Sau6477100.002160067080067101512163e-110 399
srn_4300_sRNA34993.582651522551185255144812642e-108 394
srn_4300_sRNA34988.34163144207575620759171062642e-47 191
srn_4300_sRNA34985.37164184141005914102222621051e-39 165
srn_4300_sRNA34984.05163205149922114993831062621e-35 152
srn_4300_sRNA34983.23161205119929011994482621072e-32 141
srn_4300_sRNA34988.601141212899322900452181063e-31 137
srn_4300_sRNA34987.72114131119398711941002641521e-29 132
srn_2520_Teg6099.54216101206652120686712162e-108 394
srn_4980_Teg3298.22225312942068294229212246e-108 392
srn_0260_Teg15as95.49244110946369487912442e-107 390
srn_0440_rsaK99.532121019867519888612123e-106 387
srn_3580_SprA1100.00207001922499192270512073e-105 383
srn_1810_Teg51100.002060083235583256012061e-104 381
srn_1080_RsaX05100.002050051702551722912054e-104 379
srn_3660_Sau651598.59213301974390197460212132e-103 377
srn_1210_sRNA10699.512051056987757008112052e-102 374
srn_0050_Teg196.0722990157921602012292e-102 374
srn_4110_sRNA335100.00198002431291243148811983e-100 366
srn_3390_Teg7100.00193001836056183624811932e-97 357
srn_3190_Teg6899.49195101711387171158111958e-97 355
srn_4740_sprA393.972321222810846281107712304e-95 350
srn_5010_Teg3398.47196302948790294898511965e-94 346
srn_0220_sRNA261100.00186001747418174760311862e-93 344
srn_1640_rsaD100.001770074564474582011772e-88 327
srn_2410_Sau6524100.00173001159537115970911733e-86 320
srn_4090_sprF398.84173112427527242769911722e-82 307
srn_2950_Teg698.84172201459927146009811722e-82 307
srn_9480_sRNA334100.00163002430298243046011631e-80 302
srn_3050_sRNA242100.00163001576364157652611631e-80 302
srn_2460_Teg5899.39163101190314119047611635e-79 296
srn_1550_Teg4999.391631071704871721011635e-79 296
srn_2550_Teg80100.00159001227660122781811592e-78 294
srn_9340_sRNA287100.00156001952234195238911568e-77 289
srn_1070_Sau41100.001560051632051647511568e-77 289
srn_4460_Teg2697.59166402652650265281511661e-75 285
srn_2330_Sau11100.00153001113014111316611534e-75 283
srn_4160_Sau2597.01167412460040246020511675e-74 279
srn_4160_Sau2597.30111122343479234358711113e-46 187
srn_4160_Sau2599.051050155251455261710513e-46 187
srn_4160_Sau2599.02102011994629199472911021e-44 182
srn_4120_Teg20100.00149002434733243488111496e-73 276
srn_3780_Teg13100.00148002115553211570011482e-72 274
srn_3040_Sau50100.00148001572390157253711482e-72 274
srn_2290_sbrA100.00148001069993107014011482e-72 274
srn_2660_sRNA21999.33149011322517132266511481e-70 268
srn_2580_Teg103100.00145001244566124471011451e-70 268
srn_2500_sRNA20782.0634038101199144119947713231e-70 268
srn_2500_sRNA20790.22184162408289408471792618e-62 239
srn_2500_sRNA20784.36211275289831290037792871e-50 202
srn_2500_sRNA20784.211902351679714167989619012e-43 178
srn_2500_sRNA20789.291401232822533282266914018e-42 172
srn_2500_sRNA20784.2418421620649292065108258798e-42 172
srn_2500_sRNA20793.811133325513382551447190794e-40 167
srn_2500_sRNA20791.071129114100591410170801904e-35 150
srn_2500_sRNA20784.421541461097173109732515286e-33 143
srn_2500_sRNA20788.6011411220758032075916190793e-31 137
srn_2500_sRNA20788.3911212114992721499383190804e-30 134
srn_2500_sRNA20786.6111212220649392065048190803e-26 121
srn_2200_Sau6053100.00145001051254105139811451e-70 268
srn_0200_Teg4100.0014500525065265011451e-70 268
srn_3210_sRNA25497.44156401714900171505511564e-70 267
srn_4670_RsaOT99.32146102770355277050011461e-69 265
srn_1510_rsaA100.001430068099668113811431e-69 265
srn_3610_SprC100.00142001949945195008611425e-69 263
srn_3550_Teg7599.31145011908576190871911452e-68 261
srn_0510_rsaG100.001370022896722910311373e-66 254
srn_3800_sprD97.92144302121779212192221454e-65 250
srn_3830_sprF199.26136102124911212504631385e-64 246
srn_3830_sprF198.3661103850733851336112e-22 108
srn_3140_Teg15199.26136101613422161355711365e-64 246
srn_3740_Sau6492100.00131002088756208888611316e-63 243
srn_1930.5_rsaOF100.00130002064878206500711302e-62 241
srn_1930.5_rsaOF90.291037311940301194132130311e-29 132
srn_3820_SprX96.03151122122672212282211462e-62 241
srn_3820_SprX94.001504238719438734214618e-57 222
srn_4590_Teg28100.00128002739631273975811283e-61 237
srn_2340_Sau59100.00128001114618111474511283e-61 237
srn_1910_rsaH99.221290187916887929611281e-59 231
srn_1760_sRNA14999.211271081102781115311275e-59 230
srn_1520_Sau76100.001220068115668127711226e-58 226
srn_4420_Teg25100.00121002607088260720811212e-57 224
srn_0590_sRNA3795.041416125922325936311403e-56 220
srn_3860_sRNA31598.36122202162666216278711221e-54 215
srn_2240_sprF2100.00116001061757106187211161e-54 215
srn_2830_SbrB99.15118011398067139818311182e-53 211
srn_4390_rsaOG100.00111002592876259298611118e-52 206
srn_3870_sRNA29694.071358020664472066581491838e-52 206
srn_3870_sRNA29682.701852741409984141016518316e-38 159
srn_3870_sRNA29682.161852841499277149945811833e-36 154
srn_3870_sRNA29691.671089087341587352211084e-35 150
srn_3870_sRNA29691.671088191641691652211081e-34 148
srn_3870_sRNA29691.43105901123396112350041082e-33 145
srn_3870_sRNA29681.661692371193819119398116714e-30 134
srn_3870_sRNA29683.491091423005506300561111081e-1999.0
srn_4440_sRNA361100.00109002640251264035911091e-50 202
srn_3600_SprB98.25114111938746193885911131e-49 198
srn_2540_sRNA210100.00106001208967120907211065e-49 196
srn_2400_Teg37as99.08109101157611115771911095e-49 196
srn_3460_Sau594999.07107011861523186162911062e-47 191
srn_3460_Sau5949100.00450017031671703211106624e-1584.2
srn_5000_Sau1399.04104102948139294824211043e-46 187
srn_1770_rsaOC98.9999108110488111461992e-43 178
srn_0880_Sau5971100.0096004333894334841962e-43 178
srn_4610_sRNA377100.009500112350111235959516e-43 176
srn_4610_sRNA377100.0095008261638262579516e-43 176
srn_4610_sRNA37797.899520285686728569619511e-39 165
srn_4610_sRNA37797.899520206656620666609511e-39 165
srn_4610_sRNA37797.8995209165239166179511e-39 165
srn_4610_sRNA37796.849530303090830310029516e-38 159
srn_4610_sRNA37796.849530140990514099991956e-38 159
srn_4610_sRNA37796.849530149944314995379516e-38 159
srn_4610_sRNA37796.849530109754210976369516e-38 159
srn_4610_sRNA37796.849530274273727428311956e-38 159
srn_4610_sRNA37796.8495302719802720749516e-38 159
srn_4610_sRNA37794.749550304520430452989511e-34 148
srn_4610_sRNA37796.157830282259328226708252e-28 128
srn_4610_sRNA37790.229281207597320760649331e-25 119
srn_4610_sRNA37794.3771401866587186665725957e-23 110
srn_4610_sRNA37792.315240197857419786252532e-1275.0
srn_2740_Teg10898.989810137006713701641986e-43 176
srn_0950_Sau63100.0091004871124872021911e-40 169
srn_4570_Teg2798.909110272299927230891915e-39 163
srn_4220_sRNA345100.008700251497025150561872e-38 161
srn_4220_sRNA34593.339032250933325094221875e-29 130
srn_1900_Sau1597.8392208785098786001926e-38 159
srn_3020_Teg65100.008200154542915455101821e-35 152
srn_0870_Teg38as100.0082004313954314761821e-35 152
srn_4290_sRNA348100.007900254773925478171795e-34 147
srn_4060_Sau6723100.007900241562824157061795e-34 147
srn_3110_Sau6353100.007600160083616009111762e-32 141
srn_1780_Sau6698.7379108137478138251792e-32 141
srn_4680_Sau19100.007500277092327709971758e-32 139
srn_3710_Sau6799100.006800200534020054071686e-28 126
srn_2610_Sau2498.597110128220012822701716e-28 126
srn_1570_RsaOW2100.006500245280524528696513e-26 121
srn_1570_RsaOW2100.006500198576119858256513e-26 121
srn_4540_sprAs2100.006200271781627178771621e-24 115
srn_4540_sprAs296.776220271361527136761623e-21 104
srn_4260_Sau3098.446410251970525197681645e-24 113
srn_1930.2_rsaOF97.066811255133525514016815e-24 113
srn_1930.2_rsaOF95.3865302899322899961653e-21 104
srn_1930.2_rsaOF91.306941207580120758696717e-1893.5
srn_9490_sRNA337100.005700198576319858191578e-22 106
srn_9490_sRNA337100.005700245280724528631578e-22 106
srn_3700_Teg142100.005700198576319858191578e-22 106
srn_3700_Teg142100.005700245280724528631578e-22 106
srn_3590_sprAs1100.005700192267019227261578e-22 106
srn_4840_RsaOV100.005500285397928540331551e-20 102
srn_1930.1_rsaOF98.2858108805568806131581e-20 102
srn_1930.1_rsaOF96.5558202719222719791585e-1997.1
srn_0060_Sau6598.28581021710217671581e-20 102
srn_4170_Sau23100.005400247857724786301544e-20 100
srn_0960_Teg14798.2156104892464893011561e-1999.0
srn_4530_sprAs2prime98.185510271361927136731555e-1997.1
srn_3770_Teg122100.005200211547721155281525e-1997.1
srn_1020_sRNA90100.0052005078325078831525e-1997.1
srn_1060_Teg14998.0451105158555159051518e-1789.8
srn_1460_sRNA128100.0047006357506357961473e-1687.9
srn_1000_sRNA88100.0046004990984991431461e-1586.1
srn_3850_Teg12392.00504035560535565462133e-1171.3
Biogenouest IRISA INRIA Université de Rennes 1 Région Bretagne

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