Staphylococcus aureus subsp aureus str JH9

The prediction was done using a set of srn genes identified from SRD RNA-seq analysis.
Numbers of SRD’S predicted srn sequences =
subject_seq_id identity length mismatch gapopen query_start query_end subject_start subject_end evalue bitscore
srn_4470_RsaX28100.0011770025371242538300111770.0 2174
srn_1580_sbrC100.00111900720145721263111190.0 2067
srn_1670_Teg20as100.00100900757481758489110090.0 1864
srn_0770_Teg18as100.008650035559835646218650.0 1598
srn_5020_sRNA401100.00568002813562281412915680.0 1050
srn_1590_rsaC100.005440072043472097715440.0 1005
srn_3790_sRNA30199.62532202129267212979815320.0 972
srn_3910_RNAIII100.00516002185078218559315160.0 953
srn_2130_rsaE100.00459001054423105488114590.0 848
srn_4330_Teg36as100.00452002452460245291114520.0 835
RNaseP100.00435001608358160879214350.0 804
srn_4770_sRNA385100.00432002700982270141314320.0 798
srn_0860_RsaOB100.004210044428444470414210.0 778
srn_5070_RsaX2599.74379102861335286171313790.0 695
srn_0280_sRNA16100.003720011636111673213720.0 688
srn_0280_sRNA1695.97124501167051168282493721e-50 202
srn_0280_sRNA1689.811081101167531168602493568e-32 139
srn_2250_sprG4100.00369001131082113145013690.0 682
srn_2880_RsaOQ100.00366001496717149708213660.0 676
tmRNA100.003590088562188597913590.0 664
srn_3300_Teg70100.00348001821323182167013480.0 643
srn_3570_sRNA284100.00347001979088197943413470.0 641
srn_4050_artR100.00346002293124229346913460.0 640
srn_2500_sRNA207100.00323001267169126749113231e-169 597
srn_2500_sRNA20784.5522027614733491473566802942e-53 211
srn_2500_sRNA20785.7121017211646531164861207106e-53 209
srn_2500_sRNA20784.682221961561829156205020712e-52 207
srn_2500_sRNA20792.0612691424720424845792036e-43 176
srn_2500_sRNA20781.282032562415381241558319011e-35 152
srn_2500_sRNA20790.1811210115617321561843190802e-33 145
srn_2500_sRNA20789.3811311120850622085174190792e-32 141
srn_2500_sRNA20780.202022532074313207451219023e-31 137
srn_2560_sRNA212100.00318001302041130235813187e-167 588
srn_4340_Teg23100.00307002453290245359613078e-161 568
srn_3840_sprG199.68309102134515213482313093e-160 566
srn_2530_sRNA209100.00304001276466127676913044e-159 562
srn_1990_Teg40as100.003000090118390148213007e-157 555
srn_4830_Sau6072100.00295002714798271509212954e-154 545
srn_1350_Teg45100.002910061068661097612917e-152 538
srn_3360_sRNA267100.00283001865258186554012832e-147 523
srn_3320_sRNA264100.00283001838464183874612832e-147 523
srn_3260_Teg69100.00273001788753178902512737e-142 505
srn_4300_sRNA349100.00264002426032242629512647e-137 488
srn_4300_sRNA34988.27162154208501520851751062642e-47 191
srn_4300_sRNA34984.76164194241533024154931062636e-38 159
srn_4300_sRNA34992.1111471156184715619601522636e-38 159
srn_4300_sRNA34984.66163195156168115618431062622e-37 158
srn_4300_sRNA34982.461711978728358730031022638e-32 139
srn_4520_RsaX20100.00262002574494257475512629e-136 484
srn_4190_sRNA342100.00259002356222235648012594e-134 479
srn_3280_sRNA260100.00259001808369180862712594e-134 479
srn_4100_sprG3100.00255002306187230644112557e-132 472
srn_4000_sRNA326100.00253002279744227999612539e-131 468
4.5S100.002530053669053694212539e-131 468
srn_3350_sRNA266100.00246001853463185370812467e-127 455
srn_0260_Teg15as100.002440010374310398612449e-126 451
srn_2230_sprG2100.00241001130825113106512414e-124 446
srn_2970_sRNA235100.00240001542674154291312401e-123 444
srn_2450_Sau622999.58239101251690125192812393e-121 436
srn_4550_sprA2100.00233002592770259300212331e-119 431
srn_4740_sprA3100.00230002689537268976612305e-118 425
srn_0050_Teg1100.0022900158691609712292e-117 424
srn_0030_Teg35100.0022600125541277912269e-116 418
srn_3950_Teg16100.00225002203632220385612253e-115 416
srn_4980_Teg32100.00224002801670280189312241e-114 414
srn_0930_Teg76100.002230046608746630912234e-114 412
srn_3490_RsaOE100.00220001941719194193812202e-112 407
6S100.00218001785289178550612183e-111 403
srn_2520_Teg60100.00216001274666127488112163e-110 399
srn_1490_Sau6477100.002160066736666758112163e-110 399
srn_0220_sRNA261100.00216001810405181062012163e-110 399
srn_0220_sRNA26193.9821601494744967612161e-84 315
srn_3660_Sau6515100.00213002027290202750212132e-108 394
srn_0440_rsaK100.002120021070121091212125e-108 392
srn_9360_sRNA29396.9623043378287378515442713e-105 383
srn_3580_SprA1100.00207001979609197981512073e-105 383
srn_1810_Teg51100.002060082474482494912061e-104 381
srn_1210_sRNA106100.002050055893955914312054e-104 379
srn_1080_RsaX05100.002050050589750610112054e-104 379
srn_4110_sRNA335100.00198002308466230866311983e-100 366
srn_5010_Teg33100.00196002808386280858111964e-99 363
srn_3190_Teg68100.00195001774074177426811952e-98 361
srn_3390_Teg7100.00193001897132189732411932e-97 357
srn_9500_sRNA36895.892199025768232577041843027e-97 355
srn_9500_sRNA36896.43112402577054257716511121e-45 185
srn_3870_sRNA296100.00183002176563217674511837e-92 339
srn_3870_sRNA29692.3518314086569986588111832e-68 261
srn_3870_sRNA29694.071358020757062075840491838e-52 206
srn_3870_sRNA29692.801256318700011870123177542e-43 178
srn_3870_sRNA29682.701852741473274147345518316e-38 159
srn_3870_sRNA29692.59108801743373174348011088e-37 156
srn_3870_sRNA29691.67108811261656126176210811e-34 148
srn_3870_sRNA29690.741089190884790895311086e-33 143
srn_3870_sRNA29684.06138164860120860251301672e-28 128
srn_1640_rsaD100.001770073639273656811772e-88 327
srn_2410_Sau6524100.00173001227168122734011733e-86 320
srn_4090_sprF3100.00172002306116230628711729e-86 318
srn_2950_Teg6100.00172001524069152424011729e-86 318
srn_4160_Sau25100.00167002335613233577911676e-83 309
srn_4160_Sau25100.001050059097859108210512e-48 195
srn_4160_Sau25100.001050054131454141810512e-48 195
srn_4160_Sau2598.20111112220526222063511116e-48 193
srn_4160_Sau25100.001040058563458573710416e-48 193
srn_4160_Sau2599.02102012047581204768111021e-44 182
srn_4460_Teg26100.00166002527524252768911662e-82 307
srn_3050_sRNA242100.00163001639499163966111631e-80 302
srn_2460_Teg58100.00163001258211125837311631e-80 302
srn_1550_Teg49100.001630070740470756611631e-80 302
srn_2550_Teg80100.00159001295673129583111592e-78 294
srn_3210_sRNA254100.00156001777587177774211567e-77 289
srn_3210_sRNA25494.745730177791917779751001568e-1789.8
srn_1070_Sau41100.001560050519450534911567e-77 289
srn_2330_Sau11100.00153001180555118070711533e-75 283
srn_4120_Teg20100.00149002311909231205711496e-73 276
srn_3780_Teg13100.00148002124801212494811482e-72 274
srn_3040_Sau50100.00148001635525163567211482e-72 274
srn_2660_sRNA219100.00148001390746139089311482e-72 274
srn_2290_sbrA100.00148001137482113762911482e-72 274
srn_4670_RsaOT100.00146002645881264602611463e-71 270
srn_3550_Teg75100.00145001967604196774811451e-70 268
srn_2580_Teg103100.00145001312582131272611451e-70 268
srn_2200_Sau6053100.00145001075001107514511451e-70 268
srn_0200_Teg4100.0014500430094315311451e-70 268
srn_1510_rsaA100.001430067756367770511431e-69 265
srn_0590_sRNA37100.001400027800127814011406e-68 259
srn_3610_SprC99.30142101993937199407811422e-67 257
srn_0510_rsaG100.001370024848924862511373e-66 254
srn_3800_sprD97.93145302130666213081011451e-65 252
srn_3140_Teg151100.00136001678383167851811361e-65 252
srn_3830_sprF199.28138102134514213465111383e-65 250
srn_3820_SprX96.67150112132278213242711465e-64 246
srn_3820_SprX93.331505240362840377614614e-55 217
srn_3740_Sau6492100.00131002098015209814511316e-63 243
srn_1930.5_rsaOF100.00130002074252207438111302e-62 241
srn_1930.5_rsaOF87.2510273819228819328127312e-23 111
srn_1930.5_rsaOF92.75695012617581261826127594e-20 100
srn_1930.5_rsaOF92.985740819181819237118624e-1584.2
srn_4590_Teg28100.00128002614561261468811283e-61 237
srn_2340_Sau59100.00128001182348118247511283e-61 237
srn_1910_rsaH100.001280087150387163011283e-61 237
srn_1760_sRNA149100.001270080317080329611271e-60 235
srn_1520_Sau76100.001220067772367784411226e-58 226
srn_4420_Teg25100.00121002482846248296611212e-57 224
srn_2830_SbrB100.00118001461356146147311181e-55 219
srn_3600_SprB100.00116001989018198913311161e-54 215
srn_2240_sprF2100.00116001131008113112311161e-54 215
srn_2260_sprF4100.00115001131377113149111155e-54 213
srn_4390_rsaOG100.00111002467735246784511118e-52 206
srn_4440_sRNA361100.00109002515978251608611091e-50 202
srn_2400_Teg37as100.00109001225241122534911091e-50 202
srn_2540_sRNA210100.00106001276975127708011065e-49 196
srn_5000_Sau13100.00104002807735280783811046e-48 193
srn_3460_Sau594999.06106101922582192268711062e-47 191
srn_3460_Sau5949100.00450017658561765900106624e-1584.2
srn_1770_rsaOC100.0099008031918032891994e-45 183
srn_2740_Teg108100.009800143696314370601981e-44 182
srn_0880_Sau5971100.0096004499414500361962e-43 178
srn_4610_sRNA377100.009500119112811912229516e-43 176
srn_4610_sRNA377100.0095008182938183879516e-43 176
srn_4610_sRNA377100.009500262810626282001956e-43 176
srn_4610_sRNA37797.8995201821431822371951e-39 165
srn_4610_sRNA37797.8995208193558194491951e-39 165
srn_4610_sRNA37797.899520207582520759199511e-39 165
srn_4610_sRNA37797.899520156196115620559511e-39 165
srn_4610_sRNA37797.8995209089549090489511e-39 165
srn_4610_sRNA37797.899520273378827338821951e-39 165
srn_4610_sRNA37797.879420290063229007259525e-39 163
srn_4610_sRNA37796.849530100360310036971956e-38 159
srn_4610_sRNA37796.849530116508111651759516e-38 159
srn_4610_sRNA37796.849530175786017579541956e-38 159
srn_4610_sRNA37796.849530275136127514551956e-38 159
srn_4610_sRNA37796.84952183661837549512e-37 158
srn_4610_sRNA37795.799540241549424155889513e-36 154
srn_4610_sRNA37795.799540147319514732891953e-36 154
srn_4610_sRNA37796.7492306920326921231923e-36 154
srn_4610_sRNA37791.309271208523120853229332e-27 124
srn_1900_Sau15100.0092008708448709351923e-41 171
srn_4570_Teg27100.009100259792625980161911e-40 169
srn_0950_Sau63100.0091004722254723151911e-40 169
srn_4220_sRNA345100.008700238959723896831872e-38 161
srn_4220_sRNA34597.447820238225623823331784e-30 134
srn_3020_Teg65100.008200160856116086421821e-35 152
srn_0870_Teg38as100.0082004479364480171821e-35 152
srn_4290_sRNA348100.007900242258624226641795e-34 147
srn_4060_Sau6723100.007900229428522943631795e-34 147
srn_1780_Sau66100.0079008058918059691795e-34 147
srn_1930.2_rsaOF100.007800126734912674261782e-33 145
srn_1930.2_rsaOF98.536810242618224262496813e-26 121
srn_3860_sRNA31596.558703107844610785298712e-32 141
srn_3110_Sau6353100.007600166401916640941762e-32 141
srn_4680_Sau19100.007500264644926465231758e-32 139
srn_2610_Sau24100.007100135041013504801711e-29 132
srn_3710_Sau6799100.006800205829720583641686e-28 126
srn_1570_RsaOW2100.0065007201407202041653e-26 121
srn_1570_RsaOW2100.0065007547227547861653e-26 121
srn_1570_RsaOW2100.006500203851220385766513e-26 121
srn_1570_RsaOW2100.006500202379120238556513e-26 121
srn_1570_RsaOW2100.006500126360212636666513e-26 121
srn_1570_RsaOW2100.0065009727949728586513e-26 121
srn_1570_RsaOW2100.006500224207622421401653e-26 121
srn_1570_RsaOW2100.006500247957824796421653e-26 121
srn_4260_Sau30100.006400239433223943951641e-25 119
srn_3850_Teg123100.006400216405621641191641e-25 119
srn_3850_Teg123100.0064003669943670576411e-25 119
srn_3850_Teg12388.8963529269519270116316e-1376.8
srn_4540_sprAs2100.006200259274325928041621e-24 115
srn_1930.1_rsaOF100.0058008730048730611582e-22 108
srn_1930.1_rsaOF96.5558208658088658651585e-1997.1
srn_1930.1_rsaOF96.4957208656918657471572e-1895.3
srn_0060_Sau65100.00580021788218451582e-22 108
srn_9490_sRNA337100.005700247958424796405718e-22 106
srn_9490_sRNA337100.005700224208222421385718e-22 106
srn_9490_sRNA337100.0057009727969728521578e-22 106
srn_9490_sRNA337100.005700126360412636601578e-22 106
srn_9490_sRNA337100.005700202379320238491578e-22 106
srn_9490_sRNA337100.005700203851420385701578e-22 106
srn_9490_sRNA337100.0057007547287547845718e-22 106
srn_9490_sRNA337100.0057007201467202025718e-22 106
srn_3700_Teg142100.005700247958424796405718e-22 106
srn_3700_Teg142100.005700224208222421385718e-22 106
srn_3700_Teg142100.0057009727969728521578e-22 106
srn_3700_Teg142100.005700126360412636601578e-22 106
srn_3700_Teg142100.005700202379320238491578e-22 106
srn_3700_Teg142100.005700203851420385701578e-22 106
srn_3700_Teg142100.0057007547287547845718e-22 106
srn_3700_Teg142100.0057007201467202025718e-22 106
srn_3590_sprAs1100.005700197978019798361578e-22 106
srn_0960_Teg147100.0056004743574744121563e-21 104
srn_4840_RsaOV100.005500273091927309731551e-20 102
srn_4530_sprAs2prime100.005500258847125885251551e-20 102
srn_4170_Sau23100.005400235415223542051544e-20 100
srn_3770_Teg122100.005200212472521247761525e-1997.1
srn_1020_sRNA90100.0052004917854918361525e-1997.1
srn_1060_Teg149100.0051005047295047791512e-1895.3
srn_1460_sRNA128100.0047006319236319691473e-1687.9
srn_1000_sRNA8897.8346104830644831091465e-1480.5
srn_1170_sRNA103100.0038005469675470041383e-1171.3
Biogenouest IRISA INRIA Université de Rennes 1 Région Bretagne

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