Staphylococcus aureus str M1

The prediction was done using a set of srn genes identified from SRD RNA-seq analysis.
Numbers of SRD’S predicted srn sequences =
subject_seq_id identity length mismatch gapopen query_start query_end subject_start subject_end evalue bitscore
srn_4470_RsaX2899.9211771024918042492980111770.0 2169
srn_1670_Teg20as99.70100930722503723511110090.0 1847
srn_0770_Teg18as99.198657036549536635918650.0 1559
srn_1580_sbrC99.26808606866726874791209270.0 1459
srn_5020_sRNA40199.65568202766410276697715680.0 1038
srn_1590_rsaC99.825441068684268738515440.0 1000
srn_3790_sRNA30199.44532302075516207604715320.0 966
srn_3910_RNAIII100.00516002138600213911515160.0 953
srn_2130_rsaE99.354593097379297425014590.0 832
srn_4330_Teg36as99.12452402407209240766014520.0 813
RNaseP100.00435001497465149789914350.0 804
srn_0860_RsaOB99.524212041100741142714210.0 767
srn_5070_RsaX2599.74379102813988281436613790.0 695
srn_2250_sprG499.73369101004944100531213690.0 676
srn_2880_RsaOQ99.73366101372509137287413660.0 671
srn_3840_sprG199.46367202080047208041313670.0 667
srn_3840_sprG199.35309201544263154457113091e-158 560
tmRNA98.893594085087785123513590.0 641
srn_3300_Teg7099.71348101755472175581913480.0 638
srn_0280_sRNA1697.583729012523012560113720.0 638
srn_4050_artR99.71346102244206224455113460.0 634
srn_2560_sRNA21299.37319021175813117613013181e-163 577
srn_4340_Teg23100.00307002408038240834413078e-161 568
srn_4770_sRNA38595.7535310126534322653784854321e-159 564
srn_4770_sRNA38591.368170265305926531391812e-23 111
srn_9500_sRNA368100.00302002531605253190613025e-158 558
srn_2530_sRNA20999.67304101150239115054213042e-157 556
srn_1990_Teg40as100.003000086642686672513007e-157 555
srn_1350_Teg4599.662911057253757282712913e-150 532
srn_4830_Sau607298.98295302667167266746112954e-149 529
srn_3360_sRNA267100.00283001801386180166812832e-147 523
srn_3320_sRNA264100.00283001772613177289512832e-147 523
srn_3260_Teg6999.63273101722969172324112733e-140 499
srn_4190_sRNA342100.00259002312087231234512594e-134 479
srn_4520_RsaX2099.24262202529304252956512622e-132 473
srn_4000_sRNA326100.00253002230828223108012539e-131 468
srn_3280_sRNA26099.23259201742518174277612599e-131 468
4.5S100.002530050396350421512539e-131 468
srn_3570_sRNA28496.75277901918953191922912774e-129 462
srn_3570_sRNA28494.877840191928819193652703478e-27 122
srn_4100_sprG399.22256112257339225759412551e-128 460
srn_3350_sRNA266100.00246001787611178785612467e-127 455
srn_0260_Teg15as100.002440011260211284512449e-126 451
srn_2970_sRNA235100.00240001418618141885712401e-123 444
srn_2230_sprG299.59241101004687100492712412e-122 440
srn_2450_Sau622999.16239201126848112708612391e-119 431
srn_0030_Teg35100.0022600103891061412269e-116 418
srn_3950_Teg16100.00225002156940215716412253e-115 416
srn_4980_Teg32100.00224002754402275462512241e-114 414
srn_4550_sprA298.71233302547392254762412331e-114 414
srn_0930_Teg76100.002230043277743299912234e-114 412
srn_3490_RsaOE100.00220001878235187845412202e-112 407
6S100.00218001719505171972212182e-111 403
srn_1490_Sau6477100.002160062914762936212163e-110 399
srn_0220_sRNA261100.00216001744554174476912163e-110 399
srn_2520_Teg6099.54216101148433114864812162e-108 394
srn_0440_rsaK100.002120022048022069112125e-108 392
srn_3580_SprA1100.00207001919666191987212073e-105 383
srn_4300_sRNA34992.802641812380674238093612641e-104 381
srn_4300_sRNA349100.0011100238093723810471542648e-52 206
srn_1810_Teg51100.002060078971378991812061e-104 381
srn_1080_RsaX05100.002050047308547328912054e-104 379
srn_0050_Teg196.5122980137031393112294e-104 379
srn_3660_Sau651598.59213301972807197301912132e-103 377
srn_1210_sRNA10699.512051052618052638412052e-102 374
srn_4110_sRNA335100.00198002261032226122911983e-100 366
srn_5010_Teg3399.49196102761118276131311962e-97 357
srn_3390_Teg7100.00193001833210183340211932e-97 357
srn_3190_Teg6899.49195101708523170871711957e-97 355
srn_4740_sprA393.972321222641611264184212303e-95 350
srn_1640_rsaD100.001770070293570311111772e-88 327
srn_2410_Sau6524100.00173001102585110275711733e-86 320
srn_4090_sprF398.84173112257268225744011722e-82 307
srn_2950_Teg698.84172201399073139924411722e-82 307
srn_9480_sRNA334100.00163002260039226020111639e-81 302
srn_3050_sRNA242100.00163001528603152876511639e-81 302
srn_2460_Teg5899.39163101133369113353111634e-79 296
srn_1550_Teg4999.391631067540567556711634e-79 296
srn_2550_Teg80100.00159001169446116960411592e-78 294
srn_9340_sRNA287100.00156001950651195080611567e-77 289
srn_1070_Sau41100.001560047238147253611567e-77 289
srn_4460_Teg2697.59166402482203248236811669e-76 285
srn_2330_Sau11100.00153001056128105628011533e-75 283
srn_2500_sRNA20787.5024823611410141141257803234e-74 279
srn_2500_sRNA20791.07168141391499391666792456e-58 226
srn_2500_sRNA20793.801297118635231863651802076e-48 193
srn_2500_sRNA20784.211902351678172167835419012e-43 178
srn_2500_sRNA20789.861381123916023917361242612e-42 174
srn_2500_sRNA20789.291401232653299265343514018e-42 172
srn_2500_sRNA20784.2418421620200012020180258798e-42 172
srn_2500_sRNA20793.751124223808272380935190791e-39 165
srn_2500_sRNA20792.59108808254518255582451388e-37 156
srn_4120_Teg20100.00149002264475226462311496e-73 276
srn_3780_Teg13100.00148002070685207083211482e-72 274
srn_3040_Sau50100.00148001524629152477611482e-72 274
srn_2290_sbrA100.00148001013108101325511482e-72 274
srn_2660_sRNA21999.33149011264318126446611481e-70 268
srn_2580_Teg103100.00145001186354118649811451e-70 268
srn_2200_Sau6053100.001450099436599450911451e-70 268
srn_3210_sRNA25497.44156401712036171219111563e-70 267
srn_1510_rsaA100.001430063934563948711431e-69 265
srn_3610_SprC100.00142001948360194850111424e-69 263
srn_3550_Teg7599.31145011905741190588411452e-68 261
srn_4670_RsaOT98.63146202600600260074511466e-68 259
srn_0590_sRNA37100.001400028293628307511406e-68 259
srn_3830_sprF1100.00138002080046208018311387e-67 255
srn_3830_sprF198.55138201544262154439911382e-63 244
srn_0510_rsaG100.001370025346025359611373e-66 254
srn_3800_sprD97.93145302076915207705911451e-65 252
srn_3820_SprX96.69151022077809207795911464e-64 246
srn_3140_Teg15199.26136101613205161334011364e-64 246
srn_3740_Sau6492100.00131002043887204401711316e-63 243
srn_1930.5_rsaOF100.00130002019950202007911302e-62 241
srn_1930.5_rsaOF90.291037311370871137189130311e-29 132
srn_1930.5_rsaOF87.2510273784396784496127312e-23 111
srn_1930.5_rsaOF92.985740784349784405118624e-1584.2
srn_4590_Teg28100.00128002569182256930911283e-61 237
srn_2340_Sau59100.00128001057669105779611283e-61 237
srn_1910_rsaH100.001280083681383694011283e-61 237
srn_1760_sRNA14999.211271076832576845111274e-59 230
srn_1520_Sau76100.001220063950563962611226e-58 226
srn_4420_Teg25100.00121002436697243681711212e-57 224
srn_2830_SbrB100.00118001337203133732011181e-55 219
srn_3870_sRNA29687.9818321183100183118211831e-54 215
srn_3870_sRNA29688.8915316120215602021712321833e-46 187
srn_3870_sRNA29692.371189020215192021636491661e-40 169
srn_3870_sRNA29682.701852741349123134930418316e-38 159
srn_3870_sRNA29682.161852841438422143860311833e-36 154
srn_3870_sRNA29691.671088187408987419511081e-34 148
srn_3870_sRNA29691.671088116705316715910811e-34 148
srn_3870_sRNA29691.43105901066447106655141082e-33 145
srn_3870_sRNA29681.661692371136875113703716714e-30 134
srn_3860_sRNA31598.36122202117768211788911221e-54 215
srn_2240_sprF2100.00116001004870100498511161e-54 215
srn_4390_rsaOG100.00111002422483242259311118e-52 206
srn_3600_SprB98.29117111935908193602411163e-51 204
srn_4440_sRNA361100.00109002469802246991011091e-50 202
srn_2540_sRNA210100.00106001150748115085311065e-49 196
srn_2400_Teg37as99.08109101100658110076611095e-49 196
srn_4160_Sau2598.20111112173215217332411116e-48 193
srn_4160_Sau2599.02102011993275199337511021e-44 182
srn_3460_Sau594999.07107011858679185878511062e-47 191
srn_3460_Sau5949100.00450017003051700349106624e-1584.2
srn_5000_Sau1398.08104202760467276057011041e-44 182
srn_1770_rsaOC98.9999107683467684441992e-43 178
srn_0880_Sau5971100.0096004166564167511962e-43 178
srn_4610_sRNA377100.009500106655210666469516e-43 176
srn_4610_sRNA377100.0095007834617835559516e-43 176
srn_2740_Teg10898.989810131053313106301986e-43 176
srn_0950_Sau63100.0091004389164390061911e-40 169
srn_4570_Teg2798.909110255254825526381915e-39 163
srn_4220_sRNA345100.008700234445923445451872e-38 161
srn_4220_sRNA34593.339032233882223389111875e-29 130
srn_1900_Sau1597.8392208361548362451926e-38 159
srn_3020_Teg65100.008200149766814977491821e-35 152
srn_0870_Teg38as100.0082004146624147431821e-35 152
srn_4290_sRNA348100.007900237722823773061795e-34 147
srn_4060_Sau6723100.007900224536722454451795e-34 147
srn_3110_Sau6353100.007600160061916006941762e-32 141
srn_1780_Sau6698.7379107710467711241792e-32 141
srn_4680_Sau19100.007500260116826012421758e-32 139
srn_3710_Sau6799100.006800200399020040571686e-28 126
srn_2610_Sau2498.597110122399012240601716e-28 126
srn_1570_RsaOW2100.006500228254722826116513e-26 121
srn_1570_RsaOW2100.006500198417719842416513e-26 121
srn_4540_sprAs2100.006200254736525474261621e-24 115
srn_4540_sprAs296.776220254316425432251623e-21 104
srn_1930.2_rsaOF98.466510238093723810016511e-24 115
srn_1930.2_rsaOF97.066811238082423808906815e-24 113
srn_1930.2_rsaOF91.306941203093120309996716e-1893.5
srn_4260_Sau3098.446410234919423492571645e-24 113
srn_0060_Sau65100.00580019620196771582e-22 108
srn_9490_sRNA337100.005700198417919842351578e-22 106
srn_9490_sRNA337100.005700228254922826051578e-22 106
srn_3700_Teg142100.005700198417919842351578e-22 106
srn_3700_Teg142100.005700228254922826051578e-22 106
srn_3590_sprAs1100.005700191983719198931578e-22 106
srn_4840_RsaOV100.005500268474926848031551e-20 102
srn_4170_Sau23100.005400230806223081151544e-20 100
srn_0960_Teg14798.2156104410504411051561e-1999.0
srn_4530_sprAs2prime98.185510254316825432221555e-1997.1
srn_3770_Teg122100.005200207060920706601525e-1997.1
srn_1020_sRNA90100.0052004596384596891525e-1997.1
srn_1060_Teg149100.0051004719164719661512e-1895.3
srn_1460_sRNA128100.0047005937755938211473e-1687.9
srn_1000_sRNA88100.0046004509054509501461e-1586.1
Biogenouest IRISA INRIA Université de Rennes 1 Région Bretagne

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