Staphylococcus aureus subsp aureus str JH1

The prediction was done using a set of srn genes identified from SRD RNA-seq analysis.
Numbers of SRD’S predicted srn sequences =
subject_seq_id identity length mismatch gapopen query_start query_end subject_start subject_end evalue bitscore
srn_4470_RsaX28100.0011770025370002538176111770.0 2174
srn_1580_sbrC100.00111900720021721139111190.0 2067
srn_1670_Teg20as100.00100900757357758365110090.0 1864
srn_0770_Teg18as100.008650035566835653218650.0 1598
srn_5020_sRNA401100.00568002813438281400515680.0 1050
srn_1590_rsaC100.005440072031072085315440.0 1005
srn_3790_sRNA30199.62532202129141212967215320.0 972
srn_3910_RNAIII100.00516002184952218546715160.0 953
srn_2130_rsaE100.00459001054297105475514590.0 848
srn_4330_Teg36as100.00452002452336245278714520.0 835
RNaseP100.00435001608232160866614350.0 804
srn_4770_sRNA385100.00432002700858270128914320.0 798
srn_0860_RsaOB100.004210044435444477414210.0 778
srn_5070_RsaX2599.74379102861211286158913790.0 695
srn_0280_sRNA16100.003720011643011680113720.0 688
srn_0280_sRNA1695.97124501167741168972493721e-50 202
srn_2250_sprG4100.00369001130956113132413690.0 682
srn_2880_RsaOQ100.00366001496590149695513660.0 676
tmRNA100.003590088549688585413590.0 664
srn_3300_Teg70100.00348001821197182154413480.0 643
srn_3570_sRNA284100.00347001978962197930813470.0 641
srn_4050_artR100.00346002292999229334413460.0 640
srn_2500_sRNA207100.00323001267043126736513231e-169 597
srn_2500_sRNA20784.5522027614732221473439802942e-53 211
srn_2500_sRNA20785.7121017211645271164735207106e-53 209
srn_2500_sRNA20784.682221961561703156192420712e-52 207
srn_2500_sRNA20781.282032562415257241545919011e-35 152
srn_2500_sRNA20780.202022532074187207438619023e-31 137
srn_2560_sRNA212100.00318001301915130223213187e-167 588
srn_4340_Teg23100.00307002453166245347213078e-161 568
srn_3840_sprG199.68309102134389213469713093e-160 566
srn_2530_sRNA209100.00304001276340127664313044e-159 562
srn_1990_Teg40as100.003000090105890135713007e-157 555
srn_4830_Sau6072100.00295002714674271496812954e-154 545
srn_1350_Teg45100.002910061056261085212917e-152 538
srn_3360_sRNA267100.00283001865132186541412832e-147 523
srn_3320_sRNA264100.00283001838338183862012832e-147 523
srn_3260_Teg69100.00273001788627178889912737e-142 505
srn_4300_sRNA349100.00264002425908242617112647e-137 488
srn_4300_sRNA34988.27162154208488920850491062642e-47 191
srn_4300_sRNA34984.76164194241520624153691062636e-38 159
srn_4300_sRNA34984.66163195156155515617171062622e-37 158
srn_4300_sRNA34982.461711978727108728781022638e-32 139
srn_4520_RsaX20100.00262002574370257463112629e-136 484
srn_4190_sRNA342100.00259002356097235635512594e-134 479
srn_3280_sRNA260100.00259001808243180850112594e-134 479
srn_4100_sprG3100.00255002306062230631612557e-132 472
srn_4000_sRNA326100.00253002279619227987112539e-131 468
4.5S100.002530053676153701312539e-131 468
srn_3350_sRNA266100.00246001853337185358212467e-127 455
srn_0260_Teg15as100.002440010381210405512449e-126 451
srn_2230_sprG2100.00241001130699113093912414e-124 446
srn_2970_sRNA235100.00240001542547154278612401e-123 444
srn_2450_Sau622999.58239101251564125180212393e-121 436
srn_4550_sprA2100.00233002592646259287812331e-119 431
srn_4740_sprA3100.00230002689413268964212305e-118 425
srn_0050_Teg1100.0022900159381616612292e-117 424
srn_0030_Teg35100.0022600126231284812269e-116 418
srn_3950_Teg16100.00225002203507220373112253e-115 416
srn_4980_Teg32100.00224002801546280176912241e-114 414
srn_0930_Teg76100.002230046615746637912234e-114 412
srn_3490_RsaOE100.00220001941593194181212202e-112 407
6S100.00218001785163178538012183e-111 403
srn_2520_Teg60100.00216001274540127475512163e-110 399
srn_1490_Sau6477100.002160066724266745712163e-110 399
srn_0220_sRNA261100.00216001810279181049412163e-110 399
srn_0220_sRNA26193.9821601495434974512161e-84 315
srn_3660_Sau6515100.00213002027165202737712132e-108 394
srn_0440_rsaK100.002120021077121098212125e-108 392
srn_9360_sRNA29396.9623043378357378585442713e-105 383
srn_3580_SprA1100.00207001979483197968912073e-105 383
srn_1810_Teg51100.002060082461982482412061e-104 381
srn_1210_sRNA106100.002050055901055921412054e-104 379
srn_1080_RsaX05100.002050050596850617212054e-104 379
srn_4110_sRNA335100.00198002308341230853811983e-100 366
srn_5010_Teg33100.00196002808262280845711964e-99 363
srn_3190_Teg68100.00195001773948177414211952e-98 361
srn_3390_Teg7100.00193001897006189719811932e-97 357
srn_9500_sRNA36895.892199025766992576917843027e-97 355
srn_9500_sRNA36896.43112402576930257704111121e-45 185
srn_3870_sRNA296100.00183002176437217661911837e-92 339
srn_3870_sRNA29692.3518314086557486575611832e-68 261
srn_3870_sRNA29694.071358020755802075714491838e-52 206
srn_3870_sRNA29692.801256318698751869997177542e-43 178
srn_3870_sRNA29682.701852741473147147332818316e-38 159
srn_3870_sRNA29692.59108801743247174335411088e-37 156
srn_3870_sRNA29691.67108811261530126163610811e-34 148
srn_3870_sRNA29690.741089190872290882811086e-33 143
srn_3870_sRNA29684.06138164859995860126301672e-28 128
srn_1640_rsaD100.001770073626873644411772e-88 327
srn_2410_Sau6524100.00173001227042122721411733e-86 320
srn_4090_sprF3100.00172002305991230616211729e-86 318
srn_2950_Teg6100.00172001523942152411311729e-86 318
srn_4160_Sau25100.00167002335488233565411676e-83 309
srn_4160_Sau25100.001050059091659102010512e-48 195
srn_4160_Sau25100.001050054138554148910512e-48 195
srn_4160_Sau2598.20111112220401222051011116e-48 193
srn_4160_Sau25100.001040058570558580810416e-48 193
srn_4160_Sau2599.02102012047455204755511021e-44 182
srn_4460_Teg26100.00166002527400252756511662e-82 307
srn_3050_sRNA242100.00163001639373163953511631e-80 302
srn_2460_Teg58100.00163001258085125824711631e-80 302
srn_1550_Teg49100.001630070728070744211631e-80 302
srn_2550_Teg80100.00159001295547129570511592e-78 294
srn_3210_sRNA254100.00156001777461177761611567e-77 289
srn_3210_sRNA25494.745730177779317778491001568e-1789.8
srn_1070_Sau41100.001560050526450541911567e-77 289
srn_2330_Sau11100.00153001180429118058111533e-75 283
srn_4120_Teg20100.00149002311784231193211496e-73 276
srn_3780_Teg13100.00148002124675212482211482e-72 274
srn_3040_Sau50100.00148001635399163554611482e-72 274
srn_2660_sRNA219100.00148001390620139076711482e-72 274
srn_2290_sbrA100.00148001137356113750311482e-72 274
srn_4670_RsaOT100.00146002645757264590211463e-71 270
srn_3550_Teg75100.00145001967478196762211451e-70 268
srn_2580_Teg103100.00145001312456131260011451e-70 268
srn_2200_Sau6053100.00145001074875107501911451e-70 268
srn_0200_Teg4100.0014500430784322211451e-70 268
srn_1510_rsaA100.001430067743967758111431e-69 265
srn_0590_sRNA37100.001400027807127821011406e-68 259
srn_3610_SprC99.30142101993811199395211422e-67 257
srn_0510_rsaG100.001370024855924869511373e-66 254
srn_3800_sprD97.93145302130540213068411451e-65 252
srn_3140_Teg151100.00136001678257167839211361e-65 252
srn_3830_sprF199.28138102134388213452511383e-65 250
srn_3820_SprX96.67150112132152213230111465e-64 246
srn_3820_SprX93.331505240369840384614614e-55 217
srn_3740_Sau6492100.00131002097889209801911316e-63 243
srn_1930.5_rsaOF100.00130002074126207425511302e-62 241
srn_1930.5_rsaOF87.2510273819103819203127312e-23 111
srn_4590_Teg28100.00128002614437261456411283e-61 237
srn_2340_Sau59100.00128001182222118234911283e-61 237
srn_1910_rsaH100.001280087137887150511283e-61 237
srn_1760_sRNA149100.001270080304580317111271e-60 235
srn_1520_Sau76100.001220067759967772011226e-58 226
srn_4420_Teg25100.00121002482722248284211212e-57 224
srn_2830_SbrB100.00118001461229146134611181e-55 219
srn_3600_SprB100.00116001988892198900711161e-54 215
srn_2240_sprF2100.00116001130882113099711161e-54 215
srn_2260_sprF4100.00115001131251113136511155e-54 213
srn_4390_rsaOG100.00111002467611246772111118e-52 206
srn_4440_sRNA361100.00109002515854251596211091e-50 202
srn_2400_Teg37as100.00109001225115122522311091e-50 202
srn_2540_sRNA210100.00106001276849127695411065e-49 196
srn_5000_Sau13100.00104002807611280771411046e-48 193
srn_3460_Sau594999.06106101922456192256111062e-47 191
srn_3460_Sau5949100.00450017657301765774106624e-1584.2
srn_1770_rsaOC100.0099008030668031641994e-45 183
srn_2740_Teg108100.009800143683614369331981e-44 182
srn_0880_Sau5971100.0096004500114501061962e-43 178
srn_4610_sRNA377100.009500119100211910969516e-43 176
srn_4610_sRNA377100.0095008181688182629516e-43 176
srn_4610_sRNA377100.009500262798226280761956e-43 176
srn_4610_sRNA37797.8995201822121823061951e-39 165
srn_4610_sRNA37797.8995208192308193241951e-39 165
srn_4610_sRNA37797.899520207569920757939511e-39 165
srn_4610_sRNA37797.899520156183515619299511e-39 165
srn_4610_sRNA37797.8995209088299089239511e-39 165
srn_4610_sRNA37797.899520273366427337581951e-39 165
srn_4610_sRNA37797.879420290050829006019525e-39 163
srn_4610_sRNA37796.8495306919086920021956e-38 159
srn_4610_sRNA37796.849530100347810035721956e-38 159
srn_4610_sRNA37796.849530116495511650499516e-38 159
srn_4610_sRNA37796.849530175773417578281956e-38 159
srn_4610_sRNA37796.849530275123727513311956e-38 159
srn_4610_sRNA37796.84952183730838239512e-37 158
srn_4610_sRNA37795.799540241537024154649513e-36 154
srn_4610_sRNA37795.799540147306814731621953e-36 154
srn_4610_sRNA37791.309271208510520851969332e-27 124
srn_1900_Sau15100.0092008707198708101923e-41 171
srn_4570_Teg27100.009100259780225978921911e-40 169
srn_0950_Sau63100.0091004722954723851911e-40 169
srn_4220_sRNA345100.008700238947323895591872e-38 161
srn_4220_sRNA34597.447820238213123822081784e-30 134
srn_3020_Teg65100.008200160843516085161821e-35 152
srn_0870_Teg38as100.0082004480064480871821e-35 152
srn_4290_sRNA348100.007900242246224225401795e-34 147
srn_4060_Sau6723100.007900229416022942381795e-34 147
srn_1780_Sau66100.0079008057668058441795e-34 147
srn_1930.2_rsaOF100.007800126722312673001782e-33 145
srn_1930.2_rsaOF98.536810242605824261256813e-26 121
srn_3860_sRNA31596.558703107832010784038712e-32 141
srn_3110_Sau6353100.007600166389316639681762e-32 141
srn_4680_Sau19100.007500264632526463991758e-32 139
srn_2610_Sau24100.007100135028413503541711e-29 132
srn_3710_Sau6799100.006800205817120582381686e-28 126
srn_1570_RsaOW2100.0065007200167200801653e-26 121
srn_1570_RsaOW2100.0065007545987546621653e-26 121
srn_1570_RsaOW2100.006500203838720384516513e-26 121
srn_1570_RsaOW2100.006500202366620237306513e-26 121
srn_1570_RsaOW2100.006500126347612635406513e-26 121
srn_1570_RsaOW2100.0065009726699727336513e-26 121
srn_1570_RsaOW2100.006500224195122420151653e-26 121
srn_1570_RsaOW2100.006500247945424795181653e-26 121
srn_4260_Sau30100.006400239420823942711641e-25 119
srn_3850_Teg123100.006400216393021639931641e-25 119
srn_3850_Teg123100.0064003670643671276411e-25 119
srn_3850_Teg12388.8963529268269268866316e-1376.8
srn_4540_sprAs2100.006200259261925926801621e-24 115
srn_1930.1_rsaOF100.0058008728798729361582e-22 108
srn_1930.1_rsaOF96.5558208656838657401585e-1997.1
srn_1930.1_rsaOF96.4957208655668656221572e-1895.3
srn_0060_Sau65100.00580021857219141582e-22 108
srn_9490_sRNA337100.005700247946024795165718e-22 106
srn_9490_sRNA337100.005700224195722420135718e-22 106
srn_9490_sRNA337100.0057009726719727271578e-22 106
srn_9490_sRNA337100.005700126347812635341578e-22 106
srn_9490_sRNA337100.005700202366820237241578e-22 106
srn_9490_sRNA337100.005700203838920384451578e-22 106
srn_9490_sRNA337100.0057007546047546605718e-22 106
srn_9490_sRNA337100.0057007200227200785718e-22 106
srn_3700_Teg142100.005700247946024795165718e-22 106
srn_3700_Teg142100.005700224195722420135718e-22 106
srn_3700_Teg142100.0057009726719727271578e-22 106
srn_3700_Teg142100.005700126347812635341578e-22 106
srn_3700_Teg142100.005700202366820237241578e-22 106
srn_3700_Teg142100.005700203838920384451578e-22 106
srn_3700_Teg142100.0057007546047546605718e-22 106
srn_3700_Teg142100.0057007200227200785718e-22 106
srn_3590_sprAs1100.005700197965419797101578e-22 106
srn_0960_Teg147100.0056004744274744821563e-21 104
srn_4840_RsaOV100.005500273079527308491551e-20 102
srn_4530_sprAs2prime100.005500258834725884011551e-20 102
srn_4170_Sau23100.005400235402723540801544e-20 100
srn_3770_Teg122100.005200212459921246501525e-1997.1
srn_1020_sRNA90100.0052004918554919061525e-1997.1
srn_1060_Teg149100.0051005047995048491512e-1895.3
srn_1460_sRNA128100.0047006317996318451473e-1687.9
srn_1000_sRNA8897.8346104831344831791465e-1480.5
srn_1170_sRNA103100.0038005470385470751383e-1171.3
Biogenouest IRISA INRIA Université de Rennes 1 Région Bretagne

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