Staphylococcus warneri SG1

The prediction was done using a set of srn genes identified from SRD curated sRNAs.

Numbers of SRD’S predicted srn sequences =

subject_seq_id	identity	length	mismatch	gapopen	query_start	query_end	subject_start	subject_end	evalue	bitscore
srn_1470_sRNA129	84.62	533	64	7	2198838	2199370	808	294	3e-144	514
srn_1470_sRNA129	83.77	536	69	4	2198907	2199442	811	294	1e-137	492
srn_1470_sRNA129	85.09	503	51	8	2198718	2199208	784	294	1e-137	492
srn_1470_sRNA129	83.49	545	66	6	2198556	2199100	814	294	6e-136	486
srn_1470_sRNA129	84.29	503	67	2	2198958	2199460	784	294	3e-134	481
srn_1470_sRNA129	82.90	503	68	6	2198544	2199046	778	294	6e-121	436
srn_1470_sRNA129	85.24	393	58	0	2199263	2199655	785	393	2e-111	405
srn_1470_sRNA129	83.33	444	62	3	2198537	2198974	731	294	8e-110	399
tmRNA	91.94	360	27	2	1972963	1973321	359	1	6e-141	503
srn_1480_sRNA130	82.10	542	84	6	2199330	2199860	609	70	2e-125	451
srn_1480_sRNA130	87.84	329	40	0	2199060	2199388	609	281	6e-106	387
srn_1480_sRNA130	87.84	329	40	0	2198826	2199154	609	281	6e-106	387
srn_1480_sRNA130	87.23	329	42	0	2198880	2199208	609	281	1e-102	375
srn_1480_sRNA130	88.31	308	36	0	2198970	2199277	609	302	7e-101	370
srn_1480_sRNA130	86.20	297	35	2	2199366	2199656	609	313	9e-85	316
4.5S	95.14	247	10	2	2315049	2315294	246	1	2e-106	388
RNAseP	89.57	278	22	5	1354323	1354596	435	161	1e-93	346
srn_1930_rsaOF	87.71	293	31	5	1979670	1979959	291	1	7e-91	337
srn_3960_sRNA323	98.37	184	3	0	975298	975481	184	1	5e-87	324
srn_3960_sRNA323	98.37	184	3	0	857310	857493	184	1	5e-87	324
srn_3960_sRNA323	98.37	184	3	0	764524	764707	184	1	5e-87	324
srn_3960_sRNA323	98.37	184	3	0	2266749	2266932	1	184	5e-87	324
srn_3960_sRNA323	98.37	184	3	0	2310535	2310718	1	184	5e-87	324
srn_3910_RNAIII	80.56	468	44	31	889982	890427	443	1	9e-85	316
srn_4830_Sau6072	87.97	241	27	2	385929	386168	240	1	9e-75	283
srn_2130_rsaE	92.00	200	10	5	1856498	1856694	201	5	1e-72	276
srn_2880_RsaOQ	81.27	331	39	23	1454876	1455194	348	29	1e-63	246
srn_0860_RsaOB	88.67	203	18	5	2413230	2413429	391	191	1e-62	243
srn_3320_sRNA264	85.00	240	28	8	1145480	1145713	238	1	7e-61	237
srn_0120_Teg6as	98.39	124	1	1	123037	123159	283	406	9e-55	217
srn_0120_Teg6as	98.33	120	2	0	120720	120839	287	406	4e-53	211
srn_1940_sRNA165	84.47	219	32	2	1976335	1976552	226	9	3e-54	215
srn_3510_Teg74	88.83	179	13	4	1031114	1031286	294	117	1e-53	213
srn_9380_sRNA298	99.15	117	0	1	123040	123156	18	133	2e-52	209
srn_9380_sRNA298	97.44	117	2	1	120720	120836	18	133	3e-49	198
srn_3040_Sau50	92.41	145	11	0	1329342	1329486	145	1	5e-52	207
srn_3550_Teg75	92.36	144	6	4	1020389	1020532	145	7	9e-50	200
srn_3050_sRNA242	88.89	162	18	0	1325389	1325550	162	1	9e-50	200
srn_1640_rsaD	90.07	151	11	3	2122120	2122268	174	26	2e-47	193
srn_1410_Teg77	90.20	153	8	6	2240277	2240426	149	1	2e-47	193
srn_3950_Teg16	82.20	236	25	14	873228	873457	225	1	7e-46	187
srn_4770_sRNA385	81.50	227	39	3	409312	409536	355	130	9e-45	183
srn_3310_sRNA263	91.11	135	9	3	1147402	1147534	139	6	1e-43	180
srn_1210_sRNA106	86.79	159	20	1	2293384	2293541	159	1	2e-42	176
srn_2030_Teg52	95.37	108	4	1	1946002	1946108	114	7	7e-41	171
srn_4430_sRNA360	82.80	186	32	0	624139	624324	192	7	9e-40	167
srn_1250_sRNA110	88.49	139	15	1	2278841	2278978	181	43	9e-40	167
srn_4390_rsaOG	93.69	111	6	1	646116	646225	111	1	3e-39	165
srn_4010_sRNA327	91.60	119	8	2	802901	803018	192	75	1e-38	163
srn_0030_Teg35	80.00	235	30	11	12029	12255	1	226	6e-37	158
srn_3080_Teg66	86.67	135	12	4	1316715	1316843	135	1	4e-33	145
srn_4160_Sau25	90.91	110	5	5	856819	856925	108	1	2e-32	143
srn_4160_Sau25	90.91	110	5	5	2267316	2267422	1	108	2e-32	143
srn_4160_Sau25	91.51	106	5	4	764036	764138	105	1	2e-32	143
srn_4160_Sau25	91.51	106	5	4	2311102	2311204	1	105	2e-32	143
srn_4160_Sau25	90.29	103	6	4	974814	974913	102	1	3e-29	132
srn_4140_sRNA338	100.00	68	0	0	978508	978575	68	1	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	860520	860587	68	1	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	767734	767801	68	1	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	2263655	2263722	1	68	2e-27	126
srn_4140_sRNA338	100.00	68	0	0	2307441	2307508	1	68	2e-27	126
srn_3150_Teg83	90.82	98	4	5	1270756	1270850	100	5	2e-27	126
srn_2330_Sau11	91.67	84	6	1	1784041	1784124	153	71	3e-24	115
srn_1420_Sau60	89.77	88	7	2	2238473	2238559	87	1	4e-23	111
srn_0930_Teg76	93.42	76	4	1	2374793	2374868	78	4	4e-23	111
srn_2620_Teg61	92.21	77	6	0	1577096	1577172	110	34	2e-22	110
srn_3470_sRNA274	95.59	68	2	1	1063573	1063639	70	3	6e-22	108
srn_1320_sRNA117	100.00	58	0	0	2308662	2308719	58	1	6e-22	108
srn_1320_sRNA117	100.00	58	0	0	2264876	2264933	58	1	6e-22	108
srn_1320_sRNA117	100.00	58	0	0	766523	766580	1	58	6e-22	108
srn_1320_sRNA117	100.00	58	0	0	859309	859366	1	58	6e-22	108
srn_1320_sRNA117	100.00	58	0	0	977297	977354	1	58	6e-22	108
srn_0890_sRNA71	89.41	85	8	1	2389895	2389979	87	4	2e-21	106
srn_9470_sRNA322	100.00	55	0	0	977304	977358	55	1	3e-20	102
srn_9470_sRNA322	100.00	55	0	0	859316	859370	55	1	3e-20	102
srn_9470_sRNA322	100.00	55	0	0	766530	766584	55	1	3e-20	102
srn_9470_sRNA322	100.00	55	0	0	2264872	2264926	1	55	3e-20	102
srn_9470_sRNA322	100.00	55	0	0	2308658	2308712	1	55	3e-20	102
srn_9200_sRNA101	100.00	55	0	0	2308667	2308721	55	1	3e-20	102
srn_9200_sRNA101	100.00	55	0	0	2264881	2264935	55	1	3e-20	102
srn_9200_sRNA101	100.00	55	0	0	766521	766575	1	55	3e-20	102
srn_9200_sRNA101	100.00	55	0	0	859307	859361	1	55	3e-20	102
srn_9200_sRNA101	100.00	55	0	0	977295	977349	1	55	3e-20	102
srn_4220_sRNA345	96.72	61	2	0	726233	726293	87	27	3e-20	102
srn_4150_sRNA339	100.00	55	0	0	977302	977356	55	1	3e-20	102
srn_4150_sRNA339	100.00	55	0	0	859314	859368	55	1	3e-20	102
srn_4150_sRNA339	100.00	55	0	0	766528	766582	55	1	3e-20	102
srn_4150_sRNA339	100.00	55	0	0	2264874	2264928	1	55	3e-20	102
srn_4150_sRNA339	100.00	55	0	0	2308660	2308714	1	55	3e-20	102
srn_4780_Teg31	82.73	110	19	0	409363	409472	112	3	3e-19	99.0
srn_4300_sRNA349	91.30	69	4	2	1888378	1888446	141	207	2e-17	93.5
srn_2320_sRNA195	87.21	86	6	3	171825	171909	92	173	2e-17	93.5
srn_1460_sRNA128	100.00	47	0	0	2226523	2226569	47	1	7e-16	87.9
srn_0170_Teg9as	100.00	46	0	0	120797	120842	1	46	3e-15	86.1
srn_0170_Teg9as	100.00	46	0	0	123117	123162	1	46	3e-15	86.1
srn_3190_Teg68	81.73	104	16	2	1202200	1202301	175	73	1e-14	84.2
srn_1400_sRNA124	97.73	44	1	0	2241732	2241775	44	1	2e-12	76.8