Staphylococcus aureus subsp aureus str ST398

The prediction was done using a set of srn genes identified from SRD RNA-seq analysis.
Numbers of SRD’S predicted srn sequences =
subject_seq_id identity length mismatch gapopen query_start query_end subject_start subject_end evalue bitscore
srn_4470_RsaX2899.8311772025089632510139111770.0 2163
srn_1670_Teg20as98.81101093778341779348110090.0 1796
srn_0770_Teg18as98.968659036491636578018650.0 1548
srn_1580_sbrC93.717954647426897434801209130.0 1188
srn_5020_sRNA40199.30568402776449277701615680.0 1027
srn_3910_RNAIII100.00516002147538214805315160.0 953
srn_1590_rsaC95.5453822274285874339415370.0 859
srn_2130_rsaE97.804541001048072104852564590.0 784
RNaseP99.08435401552710155314414350.0 782
srn_4330_Teg36as97.38458612423655242411214520.0 774
srn_0860_RsaOB99.054214045773245815214210.0 756
srn_5070_RsaX2598.68379502827682282806013790.0 673
srn_4770_sRNA38594.514371442666241266667214320.0 665
srn_2880_RsaOQ99.18366301440662144102713660.0 660
srn_0280_sRNA1697.853728012620712657813720.0 643
srn_0280_sRNA1696.3054201265811266342553088e-1789.8
tmRNA98.333596090830190865913591e-179 630
srn_3300_Teg7098.85348401803588180393513486e-177 621
srn_2250_sprG496.453661301079220107958513666e-172 604
srn_4050_artR97.98346702254955225530013468e-171 601
srn_2560_sRNA21298.75319311247129124744713183e-160 566
srn_4830_Sau6072100.00295002680038268033212954e-154 545
srn_1990_Teg40as99.333002092365292395113001e-153 544
srn_4340_Teg2398.36305502424496242480033072e-151 536
srn_3320_sRNA264100.00283001820729182101112832e-147 523
srn_1350_Teg4598.632914063293963322912913e-145 516
srn_2530_sRNA20996.373031101222094122239613033e-140 499
srn_3260_Teg6999.27273201777456177772812731e-138 494
srn_3360_sRNA26797.53283611847517184779812833e-135 483
srn_4520_RsaX2099.24262202545834254609512622e-132 473
4.5S100.002530055982456007612539e-131 468
srn_4100_sprG399.61256012268085226834012553e-130 466
srn_3280_sRNA26098.83256301797329179758412562e-127 457
srn_4000_sRNA32698.81253302241578224183012539e-126 451
srn_3350_sRNA26699.19246201835726183597112461e-123 444
srn_4190_sRNA34297.30259702330091233034912592e-122 440
srn_3570_sRNA28494.272791421977010197728812775e-118 425
srn_2450_Sau622998.74239301199378119961612395e-118 425
srn_0260_Teg15as97.952445011598211622512442e-117 424
srn_2970_sRNA23598.33240401487623148786212407e-117 422
srn_4550_sprA299.14233202563875256410712332e-116 420
srn_0930_Teg76100.002230047924147946312234e-114 412
srn_3490_RsaOE100.00220001923855192407412202e-112 407
srn_3950_Teg1699.11225202166101216632512257e-112 405
srn_0030_Teg3599.1222611124961272012267e-112 405
6S100.00218001773992177420912183e-111 403
srn_1490_Sau6477100.002160068643868665312163e-110 399
srn_4980_Teg3298.64221212764417276463752242e-107 390
srn_0440_rsaK99.532121022279122300212123e-106 387
srn_3660_Sau651599.06213202010490201070212133e-105 383
srn_2230_sprG295.442411011078964107920312413e-105 383
srn_0050_Teg196.5122980158061603412294e-104 379
srn_1210_sRNA10699.512051058174358194712052e-102 374
srn_1080_RsaX0599.512051052905352925712052e-102 374
srn_3390_Teg7100.00193001879618187981011932e-97 357
srn_3190_Teg6899.49195101762785176297911957e-97 355
srn_5010_Teg3398.98196202771135277133011969e-96 351
srn_1810_Teg5197.102075184557684578212061e-94 348
srn_4110_sRNA33597.98198402270365227056211982e-93 344
srn_4740_sprA393.482301232656415265664432297e-92 339
srn_1640_rsaD100.001770075888375905911772e-88 327
srn_4300_sRNA34992.662181602397117239733412181e-84 315
srn_4300_sRNA34984.76164194113870011388631062636e-38 159
srn_4300_sRNA34983.95162203243169524318552621064e-35 150
srn_4090_sprF399.42173012268014226818611724e-84 313
srn_2950_Teg699.42172101468413146858411724e-84 313
srn_2520_Teg6091.67228731220280122050712167e-82 305
srn_3050_sRNA242100.00163001583800158396211639e-81 302
srn_2550_Teg80100.00159001241294124145211592e-78 294
srn_2410_Sau652497.11173501174926117509811736e-78 292
srn_1070_Sau41100.001560052834952850411567e-77 289
srn_2330_Sau11100.00153001128439112859111533e-75 283
srn_4120_Teg20100.00149002286088228623611496e-73 276
srn_4160_Sau2596.41167512309595230976011672e-72 274
srn_4160_Sau25100.001050061355961366310512e-48 195
srn_4160_Sau2599.051051056444056454410518e-47 189
srn_4160_Sau2599.02102012029392202949211021e-44 182
srn_4160_Sau2599.021020160842060852010211e-44 182
srn_3040_Sau50100.00148001579826157997311482e-72 274
srn_2500_sRNA20796.411674223973252397491245812e-72 274
srn_2500_sRNA20785.662582242056183205643924522e-67 257
srn_2500_sRNA20793.2116253239723323973892841243e-60 233
srn_2500_sRNA20791.07168132931478931644245796e-58 226
srn_2500_sRNA20788.71186165438104438287792618e-57 222
srn_2500_sRNA20783.1822030614172931417510802942e-48 195
srn_2500_sRNA20787.501521728954998956502871382e-42 174
srn_2500_sRNA20782.842042082066747206694919011e-40 169
srn_2500_sRNA20790.081319418546011854731782044e-40 167
srn_2500_sRNA20782.272032361138751113895319015e-39 163
srn_2500_sRNA20787.30126133315278315401832072e-32 141
srn_3550_Teg75100.00145001949029194917311451e-70 268
srn_2580_Teg103100.00145001257671125781511451e-70 268
srn_2200_Sau6053100.00145001068640106878411451e-70 268
srn_9500_sRNA36893.33180111254813425483121233021e-69 265
srn_9500_sRNA36892.86112712548203254831311122e-38 161
srn_4670_RsaOT99.32146102620180262032511461e-69 265
srn_1510_rsaA100.001430069666369680511431e-69 265
srn_3780_Teg1398.65148202128316212846311484e-69 263
srn_2660_sRNA21997.99149211334840133498811482e-67 257
srn_9340_sRNA28796.73153501988156198830841567e-67 255
srn_0590_sRNA3799.291401028485228499111403e-66 254
srn_0510_rsaG100.001370025448525462111373e-66 254
srn_3610_SprC98.59142201985827198596811421e-65 252
srn_3140_Teg151100.00136001667408166754311361e-65 252
srn_1550_Teg4994.381609073142973158811604e-64 246
srn_4590_Teg28100.00128002585686258581311283e-61 237
srn_3740_Sau649299.24131102079644207977411313e-61 237
srn_3820_SprX95.271483149744349759014411e-59 231
srn_3820_SprX94.701512341571241586114615e-59 230
srn_2340_Sau5999.22128101129980113010711281e-59 231
srn_2290_sbrA95.80143511085628108577071485e-59 230
srn_1760_sRNA14999.211271082432682445211275e-59 230
srn_3210_sRNA25492.951561101766298176645311562e-58 228
srn_1910_rsaH98.441282089415289427911286e-58 226
srn_4460_Teg2697.66128302498841249896811283e-56 220
srn_4420_Teg2599.17121102452898245301811211e-55 219
srn_2830_SbrB99.15118011405301140541711182e-53 211
srn_4390_rsaOG100.00111002439305243941511118e-52 206
srn_3460_Sau5949100.00106002213946221405111065e-49 196
srn_3460_Sau5949100.00450017545671754611106624e-1584.2
srn_2540_sRNA210100.00106001222603122270811065e-49 196
srn_2400_Teg37as99.08109101173002117311011095e-49 196
srn_2240_sprF296.55116401079146107926111166e-48 193
srn_5000_Sau1399.04104102770484277058711043e-46 187
srn_1520_Sau7694.311235269682369694411223e-46 187
srn_1520_Sau76100.003800696906696943121843e-1171.3
srn_4440_sRNA36197.25109302486213248632111091e-45 185
srn_3870_sRNA29697.22108122137808213791311081e-44 182
srn_3870_sRNA29688.16152171297288297438321835e-44 180
srn_3870_sRNA29684.411862151417219141739918316e-43 176
srn_3870_sRNA29690.741088271600171610610816e-33 143
srn_3870_sRNA29686.67120122931416931532491675e-29 130
srn_3870_sRNA29688.68106912832445283254741096e-28 126
srn_3870_sRNA29681.7513721323864572386591491832e-23 111
srn_1770_rsaOC98.9999108243478244451992e-43 178
srn_4610_sRNA377100.009400113886411389579522e-42 174
srn_4610_sRNA37797.89952024383244771951e-39 165
srn_4610_sRNA37797.8995208733878734819511e-39 165
srn_4610_sRNA37797.8995202974232975179511e-39 165
srn_4610_sRNA37797.899520271602627161201951e-39 165
srn_4610_sRNA37796.849530285560628557009516e-38 159
srn_4610_sRNA37796.849530260776326078579516e-38 159
srn_4610_sRNA37796.849530238657623866709516e-38 159
srn_4610_sRNA37796.8495307159067160001956e-38 159
srn_4610_sRNA37796.849530111296611130609516e-38 159
srn_4610_sRNA37795.7995408402008402941953e-36 154
srn_4610_sRNA37795.799540141714014172341953e-36 154
srn_4610_sRNA37796.749230251854025186314953e-36 154
srn_4610_sRNA37793.6895519808009808931952e-32 141
srn_1930.5_rsaOF91.341271012056067205619211278e-42 172
srn_2740_Teg10897.969820138214113822381983e-41 171
srn_4570_Teg27100.009100256903625691261911e-40 169
srn_0950_Sau6398.9091104988854989751915e-39 163
srn_4220_sRNA345100.008700236066423607501872e-38 161
srn_1900_Sau1597.8392208934938935841926e-38 159
srn_3020_Teg65100.008200155291315529941821e-35 152
srn_4290_sRNA348100.007900239367123937491795e-34 147
srn_0870_Teg38as98.7882104613844614651825e-34 147
srn_3860_sRNA31596.5587033725953726788712e-32 141
srn_1780_Sau6697.4779208270478271251791e-30 135
srn_4060_Sau672397.447820225611622561931784e-30 134
srn_2610_Sau24100.007100129542312954931711e-29 132
srn_3110_Sau635397.377620165482216548971765e-29 130
srn_3710_Sau6799100.006800204010920401761686e-28 126
srn_1930.2_rsaOF98.536810239726723973346813e-26 121
srn_1930.2_rsaOF98.466510239732523973896511e-24 115
srn_1930.2_rsaOF95.5968304382084382751686e-23 110
srn_1930.2_rsaOF93.9466319315349315996511e-1999.0
srn_1930.2_rsaOF96.3655202397380239743465112e-1791.6
srn_1930.2_rsaOF89.716851185464918547161661e-1586.1
srn_4260_Sau30100.006400236539923654621641e-25 119
srn_4680_Sau1994.677540262074626208201754e-25 117
srn_4540_sprAs2100.006200256384825639091621e-24 115
srn_4540_sprAs296.776220255957125596321623e-21 104
srn_4840_RsaOV100.005500269616926962231551e-20 102
srn_1930.1_rsaOF98.2858108955398955961581e-20 102
srn_1930.1_rsaOF98.215610185238418524395831e-1999.0
srn_1930.1_rsaOF94.835830216312721631845812e-1791.6
srn_1930.1_rsaOF92.985740141723514172915824e-1584.2
srn_0060_Sau6598.28581021725217821581e-20 102
srn_1570_RsaOW295.246330190491619049783654e-20 100
srn_4530_sprAs2prime98.185510255957525596291555e-1997.1
srn_3770_Teg122100.005200212824021282911525e-1997.1
srn_1020_sRNA90100.0052005173675174181525e-1997.1
srn_4170_Sau2398.155410232802123280741542e-1895.3
srn_9490_sRNA33796.305420190492019049735748e-1789.8
srn_3700_Teg14296.305420190492019049735748e-1789.8
srn_1060_Teg14998.0451105278845279341518e-1789.8
srn_1460_sRNA128100.0047006541796542251473e-1687.9
Biogenouest IRISA INRIA Université de Rennes 1 Région Bretagne

Copyright © 2005-2010 Biogenouest® - Legal notice - Contact : Contact GenOuest