Staphylococcus aureus str 502A

The prediction was done using a set of srn genes identified from SRD RNA-seq analysis.
Numbers of SRD’S predicted srn sequences =
subject_seq_id identity length mismatch gapopen query_start query_end subject_start subject_end evalue bitscore
srn_4470_RsaX28100.0011770014858691487045117710.0 2174
srn_1580_sbrC100.00111900483688484806111910.0 2067
srn_1670_Teg20as100.00100900447982448990100910.0 1864
srn_0770_Teg18as100.008650080673480759886510.0 1598
srn_5020_sRNA401100.00568001208757120932456810.0 1050
srn_1590_rsaC100.005440048397448451754410.0 1005
srn_3790_sRNA301100.00532001892983189351453210.0 983
srn_3910_RNAIII100.00516001837063183757851610.0 953
srn_2130_rsaE100.004590015007315053145910.0 848
srn_4330_Teg36as100.00452001569739157019045210.0 835
RNaseP100.00435002406840240727443510.0 804
srn_4770_sRNA385100.00432001321601132203243210.0 798
srn_0860_RsaOB100.004210076159876201842110.0 778
srn_5070_RsaX25100.00379001161875116225337910.0 701
srn_0280_sRNA16100.00372001046736104710737210.0 688
srn_2250_sprG4100.003690011900711937536910.0 682
srn_2880_RsaOQ100.00366002518095251846036610.0 676
tmRNA100.003590031897531933335910.0 664
srn_3300_Teg70100.00348002200713220106034810.0 643
srn_3570_sRNA284100.00347002042835204318134710.0 641
srn_4050_artR100.00346001729186172953134610.0 640
srn_2500_sRNA207100.00323002747617274793932311e-169 597
srn_2560_sRNA212100.00318002712752271306931816e-167 588
srn_4340_Teg23100.00307001569054156936030718e-161 568
srn_3840_sprG199.68309101887960188826830913e-160 566
srn_2530_sRNA209100.00304002738339273864230414e-159 562
srn_1990_Teg40as100.003000030321930351830016e-157 555
srn_4830_Sau6072100.00295001307922130821629514e-154 545
srn_1350_Teg45100.002910059552059581029116e-152 538
srn_3360_sRNA267100.00283002156843215712528312e-147 523
srn_3320_sRNA264100.00283002183637218391928312e-147 523
srn_3260_Teg69100.00273002226671222694327316e-142 505
srn_4300_sRNA349100.00264001596355159661826416e-137 488
srn_4520_RsaX20100.00262001449365144962626218e-136 484
srn_4190_sRNA342100.00259001666175166643325914e-134 479
srn_3280_sRNA260100.00259002207069220732725914e-134 479
srn_4100_sprG3100.00255001716214171646825517e-132 472
srn_4000_sRNA326100.00253001742659174291125318e-131 468
4.5S100.002530066935966961125318e-131 468
srn_3350_sRNA266100.00246002168675216892024617e-127 455
srn_0260_Teg15as100.00244001059482105972524418e-126 451
srn_2230_sprG2100.002410011939211963224114e-124 446
srn_2970_sRNA235100.00240002472264247250324011e-123 444
srn_2450_Sau622999.58239102763180276341823912e-121 436
srn_4550_sprA2100.00233001431164143139623311e-119 431
srn_4740_sprA3100.00230001333248133347723015e-118 425
srn_0050_Teg1100.00229001100789110101722912e-117 424
srn_0030_Teg35100.00226001104107110433222619e-116 418
srn_3950_Teg16100.00225001818799181902322513e-115 416
srn_4980_Teg32100.00224001220993122121622411e-114 414
srn_0930_Teg76100.002230073999374021522314e-114 412
srn_3490_RsaOE100.00220002080331208055022012e-112 407
6S100.00218002230190223040721812e-111 403
srn_2520_Teg60100.00216002740227274044221613e-110 399
srn_1490_Sau6477100.002160053881753903221613e-110 399
srn_3660_Sau6515100.00213001995409199562121311e-108 394
srn_0440_rsaK100.002120095240495261521215e-108 392
srn_3580_SprA1100.00207002042454204266020713e-105 383
srn_1810_Teg51100.002060038152538173020611e-104 381
srn_1210_sRNA106100.002050064715864736220514e-104 379
srn_1080_RsaX05100.002050070020070040420514e-104 379
srn_4110_sRNA335100.00198001713992171418919813e-100 366
srn_5010_Teg33100.00196001214305121450019614e-99 363
srn_3190_Teg68100.00195002241372224156619511e-98 361
srn_3390_Teg7100.00193002125059212525119312e-97 357
srn_9500_sRNA36895.892199014470791447297302847e-97 355
srn_3870_sRNA296100.00183001845911184609318317e-92 339
srn_1640_rsaD100.001770046838346855917711e-88 327
srn_2410_Sau6524100.0017300230532322517312e-86 320
srn_4090_sprF3100.00172001716368171653917219e-86 318
srn_2950_Teg6100.00172002490937249110817219e-86 318
srn_4160_Sau25100.00167001686876168704216715e-83 309
srn_4460_Teg26100.00163001496480149664216649e-81 302
srn_3050_sRNA242100.00163002375978237614016319e-81 302
srn_2460_Teg58100.00163002756735275689716319e-81 302
srn_1550_Teg49100.001630049731349747516319e-81 302
srn_2550_Teg80100.00159002719279271943715912e-78 294
srn_3210_sRNA254100.00156002237898223805315617e-77 289
srn_3210_sRNA25494.745730223772122377771561008e-1789.8
srn_1070_Sau41100.001560070095370110815617e-77 289
srn_2330_Sau11100.0015300697506990215313e-75 283
srn_4120_Teg20100.00149001710598171074614915e-73 276
srn_3780_Teg13100.00148001897833189798014812e-72 274
srn_3040_Sau50100.00148002379960238010714812e-72 274
srn_2660_sRNA219100.00148002624283262443014812e-72 274
srn_2290_sbrA100.001480011282811297514812e-72 274
srn_4670_RsaOT100.00146001378140137828514613e-71 270
srn_3550_Teg75100.00145002054520205466414519e-71 268
srn_2580_Teg103100.00145002702384270252814519e-71 268
srn_2200_Sau6053100.001450012980912995314519e-71 268
srn_1510_rsaA100.001430052869352883514311e-69 265
srn_3610_SprC100.00142002027314202745514214e-69 263
srn_0590_sRNA37100.001400088517588531414016e-68 259
srn_0510_rsaG100.001370091469091482613713e-66 254
srn_3800_sprD97.93145301891971189211514519e-66 252
srn_3140_Teg151100.00136002337121233725613619e-66 252
srn_3830_sprF199.28138101888132188826913813e-65 250
srn_3820_SprX96.67150111890356189050514614e-64 246
srn_3740_Sau6492100.00131001924636192476613116e-63 243
srn_1930.5_rsaOF100.00130001948459194858813012e-62 241
srn_4590_Teg28100.00128001409478140960512813e-61 237
srn_2340_Sau59100.0012800679196804612813e-61 237
srn_1910_rsaH100.001280033332433345112813e-61 237
srn_1760_sRNA149100.001270040317840330412719e-61 235
srn_3860_sRNA315100.00122001853270185339112216e-58 226
srn_1520_Sau76100.001220052855452867512216e-58 226
srn_4420_Teg25100.00121001541204154132412112e-57 224
srn_2830_SbrB100.00118002553704255382111819e-56 219
srn_3600_SprB100.00116002032259203237411611e-54 215
srn_2240_sprF2100.001160011933411944911611e-54 215
srn_2260_sprF4100.001150011896611908011514e-54 213
srn_4390_rsaOG100.00111001554805155491511117e-52 206
srn_4440_sRNA361100.00109001508082150819010919e-51 202
srn_2400_Teg37as100.0010900250452515310919e-51 202
srn_3460_Sau5949100.00106002099696209980110614e-49 196
srn_3460_Sau5949100.00450022497402249784621064e-1584.2
srn_2540_sRNA210100.00106002738028273813310614e-49 196
srn_5000_Sau13100.00104001215048121515110416e-48 193
srn_1770_rsaOC100.0099004031854032839913e-45 183
srn_2740_Teg108100.009800257811725782149811e-44 182
srn_0880_Sau5971100.0096007562667563619612e-43 178
srn_4610_sRNA377100.00950059172592661956e-43 176
srn_4610_sRNA377100.0095003880873881811956e-43 176
srn_4610_sRNA377100.009500139596613960609516e-43 176
srn_1900_Sau15100.0092003340193341109213e-41 171
srn_4570_Teg27100.009100142615014262409111e-40 169
srn_0950_Sau63100.0091007339877340779111e-40 169
srn_4220_sRNA345100.008700163296716330538712e-38 161
srn_4220_sRNA34597.447820164032216403997813e-30 134
srn_3020_Teg65100.008200240699024070718211e-35 152
srn_0870_Teg38as100.0082007582857583668211e-35 152
srn_4290_sRNA348100.007900159998616000647914e-34 147
srn_4060_Sau6723100.007900172829217283707914e-34 147
srn_1780_Sau66100.0079004005054005837914e-34 147
srn_1930.2_rsaOF100.007800274768227477597812e-33 145
srn_1930.2_rsaOF98.536810159640115964681683e-26 121
srn_3110_Sau6353100.007600235154523516207612e-32 141
srn_4680_Sau19100.007500137764313777177518e-32 139
srn_2610_Sau24100.007100266469426647647111e-29 132
srn_3710_Sau6799100.006800196447619645436816e-28 126
srn_1570_RsaOW2100.0065002320952321591653e-26 121
srn_1570_RsaOW2100.0065005068425069061653e-26 121
srn_1570_RsaOW2100.006500178051517805796513e-26 121
srn_1570_RsaOW2100.006500198433519843991653e-26 121
srn_1570_RsaOW2100.0065004847474848116513e-26 121
srn_1570_RsaOW2100.0065003539613540256513e-26 121
srn_1570_RsaOW2100.006500275144227515061653e-26 121
srn_4260_Sau30100.006400162825516283186411e-25 119
srn_4540_sprAs2100.006200143136214314236211e-24 115
srn_1930.1_rsaOF100.0058003318933319505812e-22 108
srn_1930.1_rsaOF96.5558203390893391465815e-1997.1
srn_1930.1_rsaOF96.4957203392073392635712e-1895.3
srn_0060_Sau65100.005800109504110950985812e-22 108
srn_9490_sRNA337100.005700275144827515045718e-22 106
srn_9490_sRNA337100.0057003539633540191578e-22 106
srn_9490_sRNA337100.0057004847494848051578e-22 106
srn_9490_sRNA337100.005700198434119843975718e-22 106
srn_9490_sRNA337100.005700178051717805731578e-22 106
srn_9490_sRNA337100.0057005068485069045718e-22 106
srn_9490_sRNA337100.0057002321012321575718e-22 106
srn_3700_Teg142100.005700275144827515045718e-22 106
srn_3700_Teg142100.0057003539633540191578e-22 106
srn_3700_Teg142100.0057004847494848051578e-22 106
srn_3700_Teg142100.005700198434119843975718e-22 106
srn_3700_Teg142100.005700178051717805731578e-22 106
srn_3700_Teg142100.0057005068485069045718e-22 106
srn_3700_Teg142100.0057002321012321575718e-22 106
srn_3590_sprAs1100.005700204243320424895718e-22 106
srn_0960_Teg147100.0056007318907319455613e-21 104
srn_4840_RsaOV100.005500129204112920955511e-20 102
srn_4530_sprAs2prime100.005500143564114356955511e-20 102
srn_4170_Sau23100.005400166845016685035414e-20 100
srn_3770_Teg122100.005200189800518980565215e-1997.1
srn_1020_sRNA90100.0052007144667145175215e-1997.1
srn_1060_Teg149100.0051007015237015735112e-1895.3
srn_1460_sRNA128100.0047005745265745724713e-1687.9
srn_3850_Teg12393.2259222789112789674621e-1586.1
srn_1000_sRNA88100.0046007231937232384611e-1586.1
srn_1170_sRNA103100.0038006592976593343813e-1171.3
Biogenouest IRISA INRIA Université de Rennes 1 Région Bretagne

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