Staphylococcus aureus subsp aureus str COL

The prediction was done using a set of srn genes identified from SRD RNA-seq analysis.
Numbers of SRD’S predicted srn sequences =
subject_seq_id identity length mismatch gapopen query_start query_end subject_start subject_end evalue bitscore
srn_4470_RsaX2899.9211771024362952437471111770.0 2169
srn_1670_Teg20as99.60100940747679748687110090.0 1842
srn_0770_Teg18as99.198657034923135009518650.0 1559
srn_1580_sbrC99.26808607118487126551209270.0 1459
srn_5020_sRNA40199.65568202714470271503715680.0 1038
srn_1590_rsaC99.825441071201871256115440.0 1000
srn_3910_RNAIII100.00516002082422208293715160.0 953
srn_2130_rsaE99.35459301014891101534914590.0 832
srn_4330_Teg36as99.12452402351401235185214520.0 813
RNaseP100.00435001525139152557314350.0 804
srn_0860_RsaOB99.764211043831943873914210.0 773
srn_5070_RsaX2599.74379102762217276259513790.0 695
srn_2250_sprG499.73369101046044104641213690.0 676
srn_2880_RsaOQ99.73366101413781141414613660.0 671
tmRNA98.893594087595587631313590.0 641
srn_3300_Teg7099.71348101742260174260713480.0 638
srn_0280_sRNA1697.583729010740710777813720.0 638
srn_4050_artR99.71346102188215218856013460.0 634
srn_2560_sRNA21299.37319021217048121736513181e-163 577
srn_4340_Teg23100.00307002352230235253613078e-161 568
srn_4770_sRNA38595.7535310126016962602048854321e-159 564
srn_4770_sRNA38591.368170260132326014031812e-23 111
srn_9500_sRNA368100.00302002476107247640813025e-158 558
srn_2530_sRNA20999.67304101191474119177713042e-157 556
srn_1990_Teg40as100.003000089157789187613006e-157 555
srn_1350_Teg4599.662911059753059782012913e-150 532
srn_4830_Sau607298.98295302615432261572612954e-149 529
srn_3360_sRNA267100.00283001788171178845312832e-147 523
srn_3320_sRNA264100.00283001759401175968312832e-147 523
srn_3260_Teg6999.63273101716444171671612733e-140 499
srn_4190_sRNA342100.00259002256274225653212594e-134 479
srn_4520_RsaX2099.24262202473807247406812622e-132 473
srn_4000_sRNA326100.00253002174837217508912539e-131 468
srn_3280_sRNA26099.23259201735993173625112599e-131 468
4.5S100.002530052442652467812539e-131 468
srn_3570_sRNA28496.75277901906176190645212774e-129 462
srn_3570_sRNA28498.597110190604419061141716e-28 126
srn_3570_sRNA28494.877840190651119065882703478e-27 122
srn_4100_sprG399.22256112201282220153712551e-128 460
srn_3350_sRNA266100.00246001774399177464412467e-127 455
srn_0260_Teg15as100.0024400947799502212449e-126 451
srn_2970_sRNA235100.00240001459891146013012401e-123 444
srn_2230_sprG299.17242111045786104602712419e-121 435
srn_2450_Sau622999.16239201168083116832112391e-119 431
srn_0030_Teg35100.0022600125191274412269e-116 418
srn_3950_Teg16100.00225002100762210098612253e-115 416
srn_4980_Teg32100.00224002702470270269312241e-114 414
srn_4550_sprA298.71233302491894249212612331e-114 414
srn_0930_Teg76100.002230046008846031012234e-114 412
srn_3490_RsaOE100.00220001865234186545312202e-112 407
6S100.00218001712980171319712182e-111 403
srn_1490_Sau6477100.002160065432165453612163e-110 399
srn_2520_Teg6099.54216101189668118988312161e-108 394
srn_0440_rsaK100.002120020268120289212125e-108 392
srn_4300_sRNA34992.802641812324862232512412641e-104 381
srn_4300_sRNA34988.34163144201957420197351062642e-47 191
srn_4300_sRNA34985.37164184139047013906332621051e-39 165
srn_4300_sRNA34984.05163205147889814790601062621e-35 152
srn_1810_Teg51100.002060081495781516212061e-104 381
srn_1080_RsaX05100.002050049354849375212054e-104 379
srn_0050_Teg196.5122980158331606112294e-104 379
srn_3660_Sau651598.59213301961561196177312131e-103 377
srn_3580_SprA199.52208011906889190709612071e-103 377
srn_1210_sRNA10699.512051054664454684812052e-102 374
srn_4110_sRNA335100.00198002204975220517211983e-100 366
srn_5010_Teg3399.49196102709186270938111962e-97 357
srn_3390_Teg7100.00193001819994182018611932e-97 357
srn_3190_Teg6899.49195101701998170219211957e-97 355
srn_4740_sprA393.972321222589875259010612303e-95 350
srn_1640_rsaD100.001770072811172828711772e-88 327
srn_2410_Sau6524100.00173001143821114399311733e-86 320
srn_4090_sprF398.84173112201211220138311722e-82 307
srn_2950_Teg698.84172201440346144051711722e-82 307
srn_9480_sRNA334100.00163002203982220414411639e-81 302
srn_3050_sRNA242100.00163001556278155644011639e-81 302
srn_2460_Teg5899.39163101174604117476611634e-79 296
srn_1550_Teg4999.391631070058170074311634e-79 296
srn_2550_Teg80100.00159001210681121083911592e-78 294
srn_9340_sRNA287100.00156001939404193955911567e-77 289
srn_1070_Sau41100.001560049284449299911567e-77 289
srn_4460_Teg2697.59166402426694242685911669e-76 285
srn_4160_Sau2597.60167312233710223387511679e-76 285
srn_4160_Sau25100.001050057788157798510512e-48 195
srn_4160_Sau25100.001050052903952914310512e-48 195
srn_4160_Sau2598.20111112117220211732911116e-48 193
srn_4160_Sau25100.001040057267057277310416e-48 193
srn_4160_Sau2599.02102011982081198218111021e-44 182
srn_2330_Sau11100.00153001097229109738111533e-75 283
srn_2500_sRNA20787.5024823611822491182492803234e-74 279
srn_2500_sRNA20791.07168141418811418978792456e-58 226
srn_2500_sRNA20793.801297118504661850594802076e-48 193
srn_2500_sRNA20784.211902351671647167182919012e-43 178
srn_2500_sRNA20789.861381124189144190481242612e-42 174
srn_2500_sRNA20789.291401232601563260169914018e-42 172
srn_2500_sRNA20781.88160235276686327670202941395e-29 130
srn_4120_Teg20100.00149002208418220856611496e-73 276
srn_3780_Teg13100.00148002059374205952111482e-72 274
srn_3040_Sau50100.00148001552304155245111482e-72 274
srn_2290_sbrA100.00148001054208105435511482e-72 274
srn_2660_sRNA21999.33149011305587130573511489e-71 268
srn_2580_Teg103100.00145001227589122773311459e-71 268
srn_2200_Sau6053100.00145001035464103560811459e-71 268
srn_3210_sRNA25497.44156401705511170566611563e-70 267
srn_4670_RsaOT99.32146102544978254512311461e-69 265
srn_1510_rsaA100.001430066451966466111431e-69 265
srn_3610_SprC100.00142001937114193725511424e-69 263
srn_3550_Teg7599.31145011892831189297411452e-68 261
srn_0590_sRNA37100.001400026513826527711406e-68 259
srn_0510_rsaG100.001370023566223579811373e-66 254
srn_3140_Teg15199.26136101593339159347411364e-64 246
srn_3740_Sau6492100.00131002032576203270611316e-63 243
srn_1930.5_rsaOF100.00130002008756200888511302e-62 241
srn_1930.5_rsaOF90.291037311783221178424130311e-29 132
srn_1930.5_rsaOF87.2510273809640809740127312e-23 111
srn_4590_Teg28100.00128002513685251381211283e-61 237
srn_2340_Sau59100.00128001098896109902311283e-61 237
srn_1910_rsaH100.001280086183386196011283e-61 237
srn_1520_Sau76100.001220066467966480011226e-58 226
srn_4420_Teg25100.00121002380888238100811212e-57 224
srn_1760_sRNA14998.431272079356979369511272e-57 224
srn_3820_SprX94.001504239772439787214617e-57 222
srn_3860_sRNA31599.181221035716635728712213e-56 220
srn_2830_SbrB100.00118001378476137859311181e-55 219
srn_2240_sprF2100.00116001045970104608511161e-54 215
srn_4390_rsaOG100.00111002366675236678511117e-52 206
srn_3870_sRNA29694.071358020102662010400491837e-52 206
srn_3870_sRNA29682.701852741390395139057618316e-38 159
srn_3870_sRNA29682.161852841478954147913511833e-36 154
srn_3870_sRNA29691.671088189924089934611081e-34 148
srn_3870_sRNA29691.671088114925514936110811e-34 148
srn_3870_sRNA29691.43105901107674110777841082e-33 145
srn_3870_sRNA29682.251692251178110117827216718e-32 139
srn_3600_SprB98.29117111923141192325711163e-51 204
srn_4440_sRNA361100.00109002414294241440211091e-50 202
srn_2540_sRNA210100.00106001191983119208811064e-49 196
srn_2400_Teg37as99.08109101141894114200211094e-49 196
srn_3460_Sau594999.07107011845622184572811062e-47 191
srn_3460_Sau5949100.00450016937801693824106624e-1584.2
srn_5000_Sau1398.08104202708535270863811041e-44 182
srn_0880_Sau5971100.0096004439684440631962e-43 178
srn_4610_sRNA377100.009500110777911078739516e-43 176
srn_4610_sRNA377100.0095008087058087999516e-43 176
srn_4610_sRNA37797.899520201038520104799511e-39 165
srn_4610_sRNA37797.8995208993478994419511e-39 165
srn_4610_sRNA37797.879420280334128034349525e-39 163
srn_4610_sRNA37796.8495306924606925541956e-38 159
srn_4610_sRNA37796.849530147912014792149516e-38 159
srn_4610_sRNA37796.849530139031613904101956e-38 159
srn_4610_sRNA37796.849530251679125168851956e-38 159
srn_4610_sRNA37795.799540108175710818519513e-36 154
srn_4610_sRNA37796.157830260162326017008252e-28 128
srn_4610_sRNA37790.229281201979120198829331e-25 119
srn_4610_sRNA37794.3771401850856185092625956e-23 110
srn_2740_Teg10898.989810135180713519041986e-43 176
srn_1770_rsaOC97.9899207935907936881998e-42 172
srn_0950_Sau63100.0091004662274663171911e-40 169
srn_4570_Teg2798.909110249705124971411915e-39 163
srn_4220_sRNA345100.008700228864722887331872e-38 161
srn_4220_sRNA34593.339032228300922830981875e-29 130
srn_1900_Sau1597.8392208611738612641926e-38 159
srn_3020_Teg65100.008200152534215254231821e-35 152
srn_0870_Teg38as100.0082004419744420551821e-35 152
srn_4290_sRNA348100.007900232141623214941795e-34 147
srn_4060_Sau6723100.007900218937621894541795e-34 147
srn_3110_Sau6353100.007600158075315808281762e-32 141
srn_1780_Sau6698.7379107962907963681792e-32 141
srn_4680_Sau19100.007500254554625456201758e-32 139
srn_2610_Sau2498.597110126522512652951716e-28 126
srn_3710_Sau679998.536810199279619928631683e-26 121
srn_1930.2_rsaOF98.536810232512623251936813e-26 121
srn_1930.2_rsaOF97.066811232501223250786815e-24 113
srn_1930.2_rsaOF91.306941201961920196876716e-1893.5
srn_1570_RsaOW2100.006500222649022265546513e-26 121
srn_1570_RsaOW2100.006500197293119729956513e-26 121
srn_1570_RsaOW2100.006500193286019329246513e-26 121
srn_4540_sprAs2100.006200249186724919281621e-24 115
srn_4540_sprAs296.776220248766624877271623e-21 104
srn_4260_Sau3098.446410229338222934451645e-24 113
srn_0060_Sau65100.00580021750218071582e-22 108
srn_9490_sRNA337100.005700193286219329181578e-22 106
srn_9490_sRNA337100.005700197293319729891578e-22 106
srn_9490_sRNA337100.005700222649222265481578e-22 106
srn_3700_Teg142100.005700193286219329181578e-22 106
srn_3700_Teg142100.005700197293319729891578e-22 106
srn_3700_Teg142100.005700222649222265481578e-22 106
srn_3590_sprAs1100.005700190706119071171578e-22 106
srn_4840_RsaOV100.005500263301326330671551e-20 102
srn_1930.1_rsaOF98.2858108632208632771581e-20 102
srn_1930.1_rsaOF91.6760318632788633371581e-1482.4
srn_4170_Sau23100.005400225224922523021544e-20 100
srn_0960_Teg14798.2156104683614684161561e-1999.0
srn_4530_sprAs2prime98.185510248767024877241555e-1997.1
srn_3770_Teg122100.005200205929820593491525e-1997.1
srn_1020_sRNA90100.0052004825834826341525e-1997.1
srn_1060_Teg149100.0051004923794924291512e-1895.3
srn_1460_sRNA128100.0047006187686188141473e-1687.9
Biogenouest IRISA INRIA Université de Rennes 1 Région Bretagne

Copyright © 2005-2010 Biogenouest® - Legal notice - Contact : Contact GenOuest